Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
C11orf88Q6PI97 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
C11orf88Q6PI97 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.76■□□□□ 0.91
C11orf88Q6PI97 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf88Q6PI97 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf88Q6PI97 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
C11orf88Q6PI97 MIR3648-2-201ENST00000581792 180 ntBASIC20.76■□□□□ 0.91
C11orf88Q6PI97 MIR3648-1-201ENST00000615959 180 ntBASIC20.76■□□□□ 0.91
C11orf88Q6PI97 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.76■□□□□ 0.91
C11orf88Q6PI97 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
C11orf88Q6PI97 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
C11orf88Q6PI97 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf88Q6PI97 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf88Q6PI97 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf88Q6PI97 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.75■□□□□ 0.91
C11orf88Q6PI97 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf88Q6PI97 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf88Q6PI97 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
C11orf88Q6PI97 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
C11orf88Q6PI97 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf88Q6PI97 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.74■□□□□ 0.91
C11orf88Q6PI97 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf88Q6PI97 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf88Q6PI97 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf88Q6PI97 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf88Q6PI97 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
C11orf88Q6PI97 PKD1P6-201ENST00000343738 4769 ntBASIC20.73■□□□□ 0.91
C11orf88Q6PI97 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf88Q6PI97 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf88Q6PI97 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.73■□□□□ 0.91
C11orf88Q6PI97 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf88Q6PI97 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf88Q6PI97 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.72■□□□□ 0.91
C11orf88Q6PI97 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf88Q6PI97 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf88Q6PI97 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf88Q6PI97 ERN1-208ENST00000606895 2068 ntBASIC20.72■□□□□ 0.91
C11orf88Q6PI97 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
C11orf88Q6PI97 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
C11orf88Q6PI97 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
C11orf88Q6PI97 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf88Q6PI97 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 AC016575.1-201ENST00000607026 382 ntBASIC20.7■□□□□ 0.9
C11orf88Q6PI97 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.7■□□□□ 0.9
C11orf88Q6PI97 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
C11orf88Q6PI97 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C11orf88Q6PI97 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.69■□□□□ 0.9
C11orf88Q6PI97 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.69■□□□□ 0.9
C11orf88Q6PI97 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C11orf88Q6PI97 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf88Q6PI97 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf88Q6PI97 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf88Q6PI97 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf88Q6PI97 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf88Q6PI97 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 CR559946.2-201ENST00000623684 991 ntBASIC20.66■□□□□ 0.9
C11orf88Q6PI97 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf88Q6PI97 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf88Q6PI97 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf88Q6PI97 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.65■□□□□ 0.9
C11orf88Q6PI97 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf88Q6PI97 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
C11orf88Q6PI97 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.65■□□□□ 0.9
C11orf88Q6PI97 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf88Q6PI97 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C11orf88Q6PI97 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
C11orf88Q6PI97 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.64■□□□□ 0.9
C11orf88Q6PI97 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
C11orf88Q6PI97 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf88Q6PI97 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf88Q6PI97 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf88Q6PI97 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms