Protein–RNA interactions for Protein: Q69YG0

TMEM42, Transmembrane protein 42, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42Q69YG0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM42Q69YG0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 AC025884.2-201ENST00000553429 711 ntBASIC20.72■□□□□ 0.91
TMEM42Q69YG0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM42Q69YG0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM42Q69YG0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM42Q69YG0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM42Q69YG0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM42Q69YG0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM42Q69YG0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM42Q69YG0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM42Q69YG0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.7■□□□□ 0.91
TMEM42Q69YG0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM42Q69YG0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM42Q69YG0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 AC092296.2-201ENST00000589470 999 ntBASIC20.68■□□□□ 0.9
TMEM42Q69YG0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM42Q69YG0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM42Q69YG0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM42Q69YG0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM42Q69YG0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM42Q69YG0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM42Q69YG0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM42Q69YG0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMEM42Q69YG0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM42Q69YG0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM42Q69YG0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMEM42Q69YG0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM42Q69YG0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM42Q69YG0 AC135731.1-201ENST00000569415 2548 ntBASIC20.64■□□□□ 0.89
TMEM42Q69YG0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 MIR3960-201ENST00000583311 91 ntBASIC20.63■□□□□ 0.89
TMEM42Q69YG0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TMEM42Q69YG0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.62■□□□□ 0.89
TMEM42Q69YG0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM42Q69YG0 SMPD5-203ENST00000639008 1464 ntBASIC20.62■□□□□ 0.89
TMEM42Q69YG0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms