Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFI1BQ5VTD9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFI1BQ5VTD9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.74■□□□□ 0.59
GFI1BQ5VTD9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 AC092803.2-201ENST00000564287 1899 ntBASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GFI1BQ5VTD9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 AP002414.2-202ENST00000590929 1450 ntBASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFI1BQ5VTD9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 AC044849.2-201ENST00000606596 710 ntBASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFI1BQ5VTD9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GFI1BQ5VTD9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 AL139125.2-201ENST00000623134 1869 ntBASIC18.69■□□□□ 0.58
GFI1BQ5VTD9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GFI1BQ5VTD9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1BQ5VTD9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.67■□□□□ 0.58
GFI1BQ5VTD9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1BQ5VTD9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1BQ5VTD9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.67■□□□□ 0.58
GFI1BQ5VTD9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFI1BQ5VTD9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GFI1BQ5VTD9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GFI1BQ5VTD9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GFI1BQ5VTD9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GFI1BQ5VTD9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.66■□□□□ 0.58
GFI1BQ5VTD9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1BQ5VTD9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1BQ5VTD9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1BQ5VTD9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.65■□□□□ 0.58
GFI1BQ5VTD9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1BQ5VTD9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1BQ5VTD9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GFI1BQ5VTD9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.64■□□□□ 0.57
GFI1BQ5VTD9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.64■□□□□ 0.57
GFI1BQ5VTD9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1BQ5VTD9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1BQ5VTD9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1BQ5VTD9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.63■□□□□ 0.57
GFI1BQ5VTD9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1BQ5VTD9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1BQ5VTD9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1BQ5VTD9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1BQ5VTD9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1BQ5VTD9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1BQ5VTD9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms