Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.29■■■□□ 2.12
COL13A1Q5TAT6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL13A1Q5TAT6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.29■■■□□ 2.12
COL13A1Q5TAT6 KRT18P24-201ENST00000344739 1156 ntBASIC28.29■■■□□ 2.12
COL13A1Q5TAT6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.29■■■□□ 2.12
COL13A1Q5TAT6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.29■■■□□ 2.12
COL13A1Q5TAT6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL13A1Q5TAT6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.28■■■□□ 2.12
COL13A1Q5TAT6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
COL13A1Q5TAT6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC28.28■■■□□ 2.12
COL13A1Q5TAT6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
COL13A1Q5TAT6 AC022517.1-201ENST00000592429 346 ntBASIC28.28■■■□□ 2.12
COL13A1Q5TAT6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL13A1Q5TAT6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL13A1Q5TAT6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL13A1Q5TAT6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
COL13A1Q5TAT6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
COL13A1Q5TAT6 AL136967.2-201ENST00000623968 743 ntBASIC28.26■■■□□ 2.11
COL13A1Q5TAT6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.26■■■□□ 2.11
COL13A1Q5TAT6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL13A1Q5TAT6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL13A1Q5TAT6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL13A1Q5TAT6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL13A1Q5TAT6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL13A1Q5TAT6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.24■■■□□ 2.11
COL13A1Q5TAT6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL13A1Q5TAT6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
COL13A1Q5TAT6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 ABHD17AP1-201ENST00000358206 933 ntBASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 RPS2P7-201ENST00000447334 885 ntBASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL13A1Q5TAT6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL13A1Q5TAT6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL13A1Q5TAT6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.22■■■□□ 2.11
COL13A1Q5TAT6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.22■■■□□ 2.11
COL13A1Q5TAT6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
COL13A1Q5TAT6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL13A1Q5TAT6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.21■■■□□ 2.11
COL13A1Q5TAT6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.21■■■□□ 2.11
COL13A1Q5TAT6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
COL13A1Q5TAT6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
COL13A1Q5TAT6 AC022616.5-201ENST00000518796 181 ntBASIC28.2■■■□□ 2.1
COL13A1Q5TAT6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
COL13A1Q5TAT6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
COL13A1Q5TAT6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 AC066615.1-201ENST00000640911 628 ntBASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.19■■■□□ 2.1
COL13A1Q5TAT6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL13A1Q5TAT6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.18■■■□□ 2.1
COL13A1Q5TAT6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL13A1Q5TAT6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
COL13A1Q5TAT6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
COL13A1Q5TAT6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.18■■■□□ 2.1
COL13A1Q5TAT6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL13A1Q5TAT6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL13A1Q5TAT6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.17■■■□□ 2.1
COL13A1Q5TAT6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.17■■■□□ 2.1
COL13A1Q5TAT6 MTDHP2-201ENST00000601468 714 ntBASIC28.17■■■□□ 2.1
COL13A1Q5TAT6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
COL13A1Q5TAT6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL13A1Q5TAT6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.16■■■□□ 2.1
COL13A1Q5TAT6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL13A1Q5TAT6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL13A1Q5TAT6 AF213884.3-201ENST00000563833 479 ntBASIC28.16■■■□□ 2.1
COL13A1Q5TAT6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC28.16■■■□□ 2.1
COL13A1Q5TAT6 AC092437.1-201ENST00000624794 1048 ntBASIC28.16■■■□□ 2.1
COL13A1Q5TAT6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL13A1Q5TAT6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL13A1Q5TAT6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
COL13A1Q5TAT6 AC024257.2-201ENST00000549699 147 ntBASIC28.15■■■□□ 2.1
COL13A1Q5TAT6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.15■■■□□ 2.1
COL13A1Q5TAT6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.15■■■□□ 2.1
COL13A1Q5TAT6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.14■■■□□ 2.1
COL13A1Q5TAT6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
COL13A1Q5TAT6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.14■■■□□ 2.1
COL13A1Q5TAT6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.14■■■□□ 2.1
COL13A1Q5TAT6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL13A1Q5TAT6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL13A1Q5TAT6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL13A1Q5TAT6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
COL13A1Q5TAT6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL13A1Q5TAT6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.12■■■□□ 2.09
COL13A1Q5TAT6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL13A1Q5TAT6 HLA-L-209ENST00000420110 1011 ntBASIC28.12■■■□□ 2.09
COL13A1Q5TAT6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC28.12■■■□□ 2.09
COL13A1Q5TAT6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL13A1Q5TAT6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms