Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CBWD3Q5JTY5 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.25■■□□□ 1.79
CBWD3Q5JTY5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CBWD3Q5JTY5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CBWD3Q5JTY5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.24■■□□□ 1.79
CBWD3Q5JTY5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 AC096887.2-201ENST00000623443 1957 ntBASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CBWD3Q5JTY5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.22■■□□□ 1.79
CBWD3Q5JTY5 MIR3960-201ENST00000583311 91 ntBASIC26.22■■□□□ 1.79
CBWD3Q5JTY5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.22■■□□□ 1.79
CBWD3Q5JTY5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CBWD3Q5JTY5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.22■■□□□ 1.79
CBWD3Q5JTY5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CBWD3Q5JTY5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CBWD3Q5JTY5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
CBWD3Q5JTY5 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.2■■□□□ 1.79
CBWD3Q5JTY5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CBWD3Q5JTY5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.2■■□□□ 1.78
CBWD3Q5JTY5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CBWD3Q5JTY5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CBWD3Q5JTY5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.19■■□□□ 1.78
CBWD3Q5JTY5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CBWD3Q5JTY5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CBWD3Q5JTY5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CBWD3Q5JTY5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.18■■□□□ 1.78
CBWD3Q5JTY5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.18■■□□□ 1.78
CBWD3Q5JTY5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.17■■□□□ 1.78
CBWD3Q5JTY5 AC007029.1-201ENST00000604183 313 ntBASIC26.17■■□□□ 1.78
CBWD3Q5JTY5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.16■■□□□ 1.78
CBWD3Q5JTY5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.16■■□□□ 1.78
CBWD3Q5JTY5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CBWD3Q5JTY5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 AC020928.2-201ENST00000588717 2197 ntBASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 RP9P-202ENST00000450133 1212 ntBASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.15■■□□□ 1.78
CBWD3Q5JTY5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CBWD3Q5JTY5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CBWD3Q5JTY5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CBWD3Q5JTY5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
CBWD3Q5JTY5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.77
CBWD3Q5JTY5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD3Q5JTY5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CBWD3Q5JTY5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CBWD3Q5JTY5 AC093536.1-201ENST00000569153 554 ntBASIC26.12■■□□□ 1.77
CBWD3Q5JTY5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.12■■□□□ 1.77
CBWD3Q5JTY5 RNF126P1-201ENST00000567452 1320 ntBASIC26.12■■□□□ 1.77
CBWD3Q5JTY5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CBWD3Q5JTY5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CBWD3Q5JTY5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CBWD3Q5JTY5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.1■■□□□ 1.77
CBWD3Q5JTY5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.1■■□□□ 1.77
CBWD3Q5JTY5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CBWD3Q5JTY5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CBWD3Q5JTY5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD3Q5JTY5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD3Q5JTY5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD3Q5JTY5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD3Q5JTY5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD3Q5JTY5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD3Q5JTY5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD3Q5JTY5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CBWD3Q5JTY5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CBWD3Q5JTY5 HSD17B1P1-201ENST00000590052 955 ntBASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms