Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SPCS3P61009 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPCS3P61009 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.48■□□□□ 0.71
SPCS3P61009 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.48■□□□□ 0.71
SPCS3P61009 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPCS3P61009 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SPCS3P61009 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.47■□□□□ 0.71
SPCS3P61009 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.47■□□□□ 0.71
SPCS3P61009 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.47■□□□□ 0.71
SPCS3P61009 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SPCS3P61009 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SPCS3P61009 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPCS3P61009 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPCS3P61009 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPCS3P61009 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SPCS3P61009 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPCS3P61009 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPCS3P61009 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.46■□□□□ 0.71
SPCS3P61009 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPCS3P61009 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPCS3P61009 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPCS3P61009 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPCS3P61009 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPCS3P61009 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.45■□□□□ 0.7
SPCS3P61009 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SPCS3P61009 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SPCS3P61009 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPCS3P61009 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPCS3P61009 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.44■□□□□ 0.7
SPCS3P61009 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPCS3P61009 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPCS3P61009 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPCS3P61009 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPCS3P61009 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.44■□□□□ 0.7
SPCS3P61009 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPCS3P61009 AC008813.1-201ENST00000536597 885 ntBASIC19.44■□□□□ 0.7
SPCS3P61009 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPCS3P61009 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPCS3P61009 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS3P61009 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS3P61009 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS3P61009 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS3P61009 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SPCS3P61009 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SPCS3P61009 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS3P61009 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SPCS3P61009 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPCS3P61009 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPCS3P61009 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.42■□□□□ 0.7
SPCS3P61009 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPCS3P61009 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.42■□□□□ 0.7
SPCS3P61009 LINC01971-201ENST00000617888 1048 ntBASIC19.42■□□□□ 0.7
SPCS3P61009 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SPCS3P61009 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.42■□□□□ 0.7
SPCS3P61009 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPCS3P61009 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPCS3P61009 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPCS3P61009 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPCS3P61009 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.41■□□□□ 0.7
SPCS3P61009 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SPCS3P61009 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPCS3P61009 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.41■□□□□ 0.7
SPCS3P61009 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SPCS3P61009 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPCS3P61009 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPCS3P61009 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.4■□□□□ 0.7
SPCS3P61009 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.4■□□□□ 0.7
SPCS3P61009 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SPCS3P61009 AC022211.4-201ENST00000625094 2161 ntBASIC19.4■□□□□ 0.7
SPCS3P61009 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPCS3P61009 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPCS3P61009 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPCS3P61009 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.39■□□□□ 0.69
SPCS3P61009 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPCS3P61009 CLDN5-201ENST00000403084 2357 ntBASIC19.39■□□□□ 0.69
SPCS3P61009 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SPCS3P61009 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.39■□□□□ 0.69
SPCS3P61009 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.39■□□□□ 0.69
SPCS3P61009 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SPCS3P61009 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPCS3P61009 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPCS3P61009 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPCS3P61009 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPCS3P61009 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPCS3P61009 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L13-201ENST00000554103 1267 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.38■□□□□ 0.69
SPCS3P61009 MIR219A2-201ENST00000608502 1504 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L15-201ENST00000611059 1267 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L23-201ENST00000615195 1269 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L24-201ENST00000617576 1269 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L22-201ENST00000618238 1269 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L20-201ENST00000619712 1269 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L21-201ENST00000622058 1269 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L10-201ENST00000622460 1267 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 AC148477.6-201ENST00000623746 465 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 DUX4L25-201ENST00000624915 1269 ntBASIC19.38■□□□□ 0.69
SPCS3P61009 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPCS3P61009 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms