Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MIR6724-4-201ENST00000617390 92 ntBASIC20.11■□□□□ 0.81
RIPPLY3P57055 MIR6724-3-201ENST00000622482 92 ntBASIC20.11■□□□□ 0.81
RIPPLY3P57055 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPPLY3P57055 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.1■□□□□ 0.81
RIPPLY3P57055 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.1■□□□□ 0.81
RIPPLY3P57055 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.1■□□□□ 0.81
RIPPLY3P57055 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.1■□□□□ 0.81
RIPPLY3P57055 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPPLY3P57055 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIPPLY3P57055 EDA-201ENST00000338901 1233 ntBASIC20.09■□□□□ 0.81
RIPPLY3P57055 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPPLY3P57055 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIPPLY3P57055 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.09■□□□□ 0.81
RIPPLY3P57055 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.08■□□□□ 0.81
RIPPLY3P57055 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RIPPLY3P57055 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIPPLY3P57055 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIPPLY3P57055 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.08■□□□□ 0.81
RIPPLY3P57055 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.08■□□□□ 0.81
RIPPLY3P57055 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPPLY3P57055 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPPLY3P57055 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RIPPLY3P57055 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPPLY3P57055 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPPLY3P57055 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPPLY3P57055 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPPLY3P57055 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RIPPLY3P57055 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.07■□□□□ 0.8
RIPPLY3P57055 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RIPPLY3P57055 AL355001.2-201ENST00000620617 1191 ntBASIC20.07■□□□□ 0.8
RIPPLY3P57055 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.07■□□□□ 0.8
RIPPLY3P57055 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.07■□□□□ 0.8
RIPPLY3P57055 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPPLY3P57055 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPPLY3P57055 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.06■□□□□ 0.8
RIPPLY3P57055 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.06■□□□□ 0.8
RIPPLY3P57055 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RIPPLY3P57055 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPPLY3P57055 AL359258.2-201ENST00000564063 1566 ntBASIC20.06■□□□□ 0.8
RIPPLY3P57055 AC087393.1-201ENST00000582896 145 ntBASIC20.06■□□□□ 0.8
RIPPLY3P57055 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.06■□□□□ 0.8
RIPPLY3P57055 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPPLY3P57055 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPPLY3P57055 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIPPLY3P57055 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPPLY3P57055 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RIPPLY3P57055 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPPLY3P57055 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.05■□□□□ 0.8
RIPPLY3P57055 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.05■□□□□ 0.8
RIPPLY3P57055 AC010997.5-201ENST00000609182 354 ntBASIC20.05■□□□□ 0.8
RIPPLY3P57055 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIPPLY3P57055 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPPLY3P57055 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.04■□□□□ 0.8
RIPPLY3P57055 AC022616.5-201ENST00000518796 181 ntBASIC20.04■□□□□ 0.8
RIPPLY3P57055 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPPLY3P57055 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPPLY3P57055 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPPLY3P57055 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPPLY3P57055 AC135731.1-201ENST00000569415 2548 ntBASIC20.04■□□□□ 0.8
RIPPLY3P57055 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RIPPLY3P57055 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.03■□□□□ 0.8
RIPPLY3P57055 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPPLY3P57055 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.03■□□□□ 0.8
RIPPLY3P57055 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPPLY3P57055 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPPLY3P57055 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPPLY3P57055 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPPLY3P57055 AL512631.2-201ENST00000604634 923 ntBASIC20.02■□□□□ 0.8
RIPPLY3P57055 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.02■□□□□ 0.8
RIPPLY3P57055 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPPLY3P57055 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPPLY3P57055 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPPLY3P57055 AL136162.1-201ENST00000607711 1078 ntBASIC20.01■□□□□ 0.79
RIPPLY3P57055 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPPLY3P57055 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPPLY3P57055 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPPLY3P57055 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPPLY3P57055 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RIPPLY3P57055 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPPLY3P57055 ABHD17AP1-201ENST00000358206 933 ntBASIC20■□□□□ 0.79
RIPPLY3P57055 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20■□□□□ 0.79
RIPPLY3P57055 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPPLY3P57055 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20■□□□□ 0.79
RIPPLY3P57055 IKBKGP1-201ENST00000612193 1073 ntBASIC20■□□□□ 0.79
RIPPLY3P57055 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPPLY3P57055 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPPLY3P57055 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20■□□□□ 0.79
RIPPLY3P57055 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPPLY3P57055 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPPLY3P57055 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.98■□□□□ 0.79
RIPPLY3P57055 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPPLY3P57055 UNC93B3-201ENST00000308076 687 ntBASIC19.98■□□□□ 0.79
RIPPLY3P57055 KRT18P24-201ENST00000344739 1156 ntBASIC19.98■□□□□ 0.79
RIPPLY3P57055 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPPLY3P57055 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPPLY3P57055 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
RIPPLY3P57055 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPPLY3P57055 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPPLY3P57055 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPPLY3P57055 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms