Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 ILV1YER086W 1731 nt7.64□□□□□ -1.19
RPN11P43588 PRM10YJL108C 1152 nt7.64□□□□□ -1.19
RPN11P43588 YGR139WYGR139W 339 nt7.63□□□□□ -1.19
RPN11P43588 LDS1YAL018C 978 nt7.63□□□□□ -1.19
RPN11P43588 CCP1YKR066C 1086 nt7.63□□□□□ -1.19
RPN11P43588 MCH1YDL054C 1461 nt7.62□□□□□ -1.19
RPN11P43588 MRPL28YDR462W 444 nt7.62□□□□□ -1.19
RPN11P43588 YFL013W-AYFL013W-A 804 nt7.62□□□□□ -1.19
RPN11P43588 LEU5YHR002W 1074 nt7.62□□□□□ -1.19
RPN11P43588 YLR194CYLR194C 765 nt7.62□□□□□ -1.19
RPN11P43588 MIP1YOR330C 3765 nt7.61□□□□□ -1.19
RPN11P43588 RFC1YOR217W 2586 nt7.61□□□□□ -1.19
RPN11P43588 YDR034W-BYDR034W-B 156 nt7.61□□□□□ -1.19
RPN11P43588 PYK2YOR347C 1521 nt7.61□□□□□ -1.19
RPN11P43588 GAL2YLR081W 1725 nt7.61□□□□□ -1.19
RPN11P43588 YCR075W-AYCR075W-A 228 nt7.6□□□□□ -1.19
RPN11P43588 HCR1YLR192C 798 nt7.6□□□□□ -1.19
RPN11P43588 LOT6YLR011W 576 nt7.59□□□□□ -1.19
RPN11P43588 YLR283WYLR283W 945 nt7.59□□□□□ -1.19
RPN11P43588 CDC34YDR054C 888 nt7.58□□□□□ -1.2
RPN11P43588 MRPL13YKR006C 795 nt7.58□□□□□ -1.2
RPN11P43588 PEX13YLR191W 1161 nt7.58□□□□□ -1.2
RPN11P43588 MDM31YHR194W 1740 nt7.58□□□□□ -1.2
RPN11P43588 GEF1YJR040W 2340 nt7.57□□□□□ -1.2
RPN11P43588 ENB1YOL158C 1821 nt7.57□□□□□ -1.2
RPN11P43588 SNT309YPR101W 528 nt7.57□□□□□ -1.2
RPN11P43588 RGD2YFL047W 2145 nt7.56□□□□□ -1.2
RPN11P43588 LST8YNL006W 912 nt7.56□□□□□ -1.2
RPN11P43588 MRPS16YPL013C 366 nt7.56□□□□□ -1.2
RPN11P43588 YPL062WYPL062W 405 nt7.56□□□□□ -1.2
RPN11P43588 NUP84YDL116W 2181 nt7.55□□□□□ -1.2
RPN11P43588 YKL031WYKL031W 414 nt7.55□□□□□ -1.2
RPN11P43588 DPH5YLR172C 903 nt7.55□□□□□ -1.2
RPN11P43588 RRS1YOR294W 612 nt7.55□□□□□ -1.2
RPN11P43588 ARR3YPR201W 1215 nt7.55□□□□□ -1.2
RPN11P43588 GNP1YDR508C 1992 nt7.55□□□□□ -1.2
RPN11P43588 ADE17YMR120C 1779 nt7.54□□□□□ -1.2
RPN11P43588 TKL2YBR117C 2046 nt7.54□□□□□ -1.2
RPN11P43588 CNE1YAL058W 1509 nt7.53□□□□□ -1.2
RPN11P43588 HSV2YGR223C 1347 nt7.52□□□□□ -1.2
RPN11P43588 MDL2YPL270W 2322 nt7.52□□□□□ -1.2
RPN11P43588 AFG1YEL052W 1530 nt7.52□□□□□ -1.21
RPN11P43588 RMD8YFR048W 1989 nt7.51□□□□□ -1.21
RPN11P43588 RDN5-2RDN5-2 119 nt7.51□□□□□ -1.21
RPN11P43588 RDN5-3RDN5-3 119 nt7.51□□□□□ -1.21
RPN11P43588 RDN5-4RDN5-4 119 nt7.51□□□□□ -1.21
RPN11P43588 RDN5-5RDN5-5 119 nt7.51□□□□□ -1.21
RPN11P43588 MRPL36YBR122C 534 nt7.51□□□□□ -1.21
RPN11P43588 SLA2YNL243W 2907 nt7.51□□□□□ -1.21
RPN11P43588 MSY1YPL097W 1479 nt7.5□□□□□ -1.21
RPN11P43588 YCR047W-AYCR047W-A 207 nt7.5□□□□□ -1.21
RPN11P43588 UBC11YOR339C 471 nt7.5□□□□□ -1.21
RPN11P43588 GAA1YLR088W 1845 nt7.49□□□□□ -1.21
RPN11P43588 BDF2YDL070W 1917 nt7.48□□□□□ -1.21
RPN11P43588 GTB1YDR221W 2109 nt7.48□□□□□ -1.21
RPN11P43588 YEL068CYEL068C 333 nt7.47□□□□□ -1.21
RPN11P43588 RAD24YER173W 1980 nt7.46□□□□□ -1.21
RPN11P43588 YCR041WYCR041W 333 nt7.46□□□□□ -1.22
RPN11P43588 YGL194C-AYGL194C-A 243 nt7.46□□□□□ -1.22
RPN11P43588 PAN6YIL145C 930 nt7.46□□□□□ -1.22
RPN11P43588 NTE1YML059C 5040 nt7.46□□□□□ -1.22
RPN11P43588 YJR015WYJR015W 1533 nt7.46□□□□□ -1.22
RPN11P43588 YRF1-1YDR545W 5391 nt7.45□□□□□ -1.22
RPN11P43588 YRF1-5YLR467W 5391 nt7.45□□□□□ -1.22
RPN11P43588 YRF1-8YOR396W 5391 nt7.45□□□□□ -1.22
RPN11P43588 YPT1YFL038C 621 nt7.45□□□□□ -1.22
RPN11P43588 TOK1YJL093C 2076 nt7.45□□□□□ -1.22
RPN11P43588 GIR2YDR152W 798 nt7.44□□□□□ -1.22
RPN11P43588 YLR112WYLR112W 420 nt7.44□□□□□ -1.22
RPN11P43588 YPL264CYPL264C 1062 nt7.44□□□□□ -1.22
RPN11P43588 PMA2YPL036W 2844 nt7.43□□□□□ -1.22
RPN11P43588 COX9YDL067C 180 nt7.43□□□□□ -1.22
RPN11P43588 YGR182CYGR182C 354 nt7.43□□□□□ -1.22
RPN11P43588 AIM24YJR080C 1185 nt7.43□□□□□ -1.22
RPN11P43588 YLR118CYLR118C 684 nt7.43□□□□□ -1.22
RPN11P43588 TSA1YML028W 591 nt7.43□□□□□ -1.22
RPN11P43588 YNL296WYNL296W 315 nt7.43□□□□□ -1.22
RPN11P43588 EXG1YLR300W 1347 nt7.43□□□□□ -1.22
RPN11P43588 YEL053W-AYEL053W-A 348 nt7.42□□□□□ -1.22
RPN11P43588 MTR3YGR158C 753 nt7.42□□□□□ -1.22
RPN11P43588 CSM2YIL132C 642 nt7.42□□□□□ -1.22
RPN11P43588 SQT1YIR012W 1296 nt7.42□□□□□ -1.22
RPN11P43588 FBA1YKL060C 1080 nt7.42□□□□□ -1.22
RPN11P43588 YMC1YPR058W 924 nt7.42□□□□□ -1.22
RPN11P43588 COT1YOR316C 1320 nt7.42□□□□□ -1.22
RPN11P43588 YDR415CYDR415C 1125 nt7.41□□□□□ -1.22
RPN11P43588 HAP3YBL021C 435 nt7.41□□□□□ -1.22
RPN11P43588 TOS6YNL300W 309 nt7.41□□□□□ -1.22
RPN11P43588 YPR114WYPR114W 948 nt7.41□□□□□ -1.22
RPN11P43588 SEC24YIL109C 2781 nt7.4□□□□□ -1.22
RPN11P43588 THI2YBR240C 1353 nt7.4□□□□□ -1.22
RPN11P43588 YCK1YHR135C 1617 nt7.39□□□□□ -1.23
RPN11P43588 WHI2YOR043W 1461 nt7.39□□□□□ -1.23
RPN11P43588 TIM54YJL054W 1437 nt7.39□□□□□ -1.23
RPN11P43588 UTR4YEL038W 684 nt7.39□□□□□ -1.23
RPN11P43588 SNF4YGL115W 969 nt7.39□□□□□ -1.23
RPN11P43588 KTR1YOR099W 1182 nt7.39□□□□□ -1.23
RPN11P43588 YBR144CYBR144C 315 nt7.39□□□□□ -1.23
RPN11P43588 HBN1YCL026C-B 582 nt7.39□□□□□ -1.23
RPN11P43588 YKR018CYKR018C 2178 nt7.39□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 45.7 ms