Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BCKDHAP12694 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BCKDHAP12694 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BCKDHAP12694 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.11■■□□□ 1.29
BCKDHAP12694 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
BCKDHAP12694 AC126177.7-201ENST00000547904 679 ntBASIC23.11■■□□□ 1.29
BCKDHAP12694 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.11■■□□□ 1.29
BCKDHAP12694 AC016575.1-201ENST00000607026 382 ntBASIC23.11■■□□□ 1.29
BCKDHAP12694 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.11■■□□□ 1.29
BCKDHAP12694 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
BCKDHAP12694 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BCKDHAP12694 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BCKDHAP12694 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BCKDHAP12694 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BCKDHAP12694 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.1■■□□□ 1.29
BCKDHAP12694 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.09■■□□□ 1.29
BCKDHAP12694 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
BCKDHAP12694 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
BCKDHAP12694 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
BCKDHAP12694 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
BCKDHAP12694 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
BCKDHAP12694 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
BCKDHAP12694 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.08■■□□□ 1.29
BCKDHAP12694 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
BCKDHAP12694 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
BCKDHAP12694 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
BCKDHAP12694 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
BCKDHAP12694 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
BCKDHAP12694 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
BCKDHAP12694 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.07■■□□□ 1.28
BCKDHAP12694 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BCKDHAP12694 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
BCKDHAP12694 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
BCKDHAP12694 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BCKDHAP12694 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
BCKDHAP12694 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.06■■□□□ 1.28
BCKDHAP12694 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
BCKDHAP12694 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.06■■□□□ 1.28
BCKDHAP12694 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BCKDHAP12694 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.05■■□□□ 1.28
BCKDHAP12694 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
BCKDHAP12694 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BCKDHAP12694 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BCKDHAP12694 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BCKDHAP12694 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BCKDHAP12694 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BCKDHAP12694 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BCKDHAP12694 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BCKDHAP12694 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHAP12694 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHAP12694 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHAP12694 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHAP12694 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.03■■□□□ 1.28
BCKDHAP12694 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHAP12694 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHAP12694 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.02■■□□□ 1.28
BCKDHAP12694 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHAP12694 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.02■■□□□ 1.28
BCKDHAP12694 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHAP12694 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHAP12694 AC142381.3-201ENST00000568208 1670 ntBASIC23.02■■□□□ 1.28
BCKDHAP12694 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
BCKDHAP12694 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHAP12694 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.01■■□□□ 1.27
BCKDHAP12694 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.01■■□□□ 1.27
BCKDHAP12694 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.01■■□□□ 1.27
BCKDHAP12694 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.01■■□□□ 1.27
BCKDHAP12694 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHAP12694 AC022211.4-201ENST00000625094 2161 ntBASIC23.01■■□□□ 1.27
BCKDHAP12694 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.01■■□□□ 1.27
BCKDHAP12694 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23■■□□□ 1.27
BCKDHAP12694 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
BCKDHAP12694 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
BCKDHAP12694 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23■■□□□ 1.27
BCKDHAP12694 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23■■□□□ 1.27
BCKDHAP12694 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23■■□□□ 1.27
BCKDHAP12694 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BCKDHAP12694 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23■■□□□ 1.27
BCKDHAP12694 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
BCKDHAP12694 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BCKDHAP12694 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BCKDHAP12694 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHAP12694 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHAP12694 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHAP12694 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.99■■□□□ 1.27
BCKDHAP12694 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHAP12694 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHAP12694 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHAP12694 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.98■■□□□ 1.27
BCKDHAP12694 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHAP12694 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHAP12694 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHAP12694 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHAP12694 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHAP12694 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.98■■□□□ 1.27
BCKDHAP12694 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHAP12694 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHAP12694 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
BCKDHAP12694 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
BCKDHAP12694 AC093323.1-202ENST00000635031 2045 ntBASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms