Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.09■□□□□ 0.65
PF4V1P10720 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.09■□□□□ 0.65
PF4V1P10720 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PF4V1P10720 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PF4V1P10720 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PF4V1P10720 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PF4V1P10720 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PF4V1P10720 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PF4V1P10720 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PF4V1P10720 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PF4V1P10720 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
PF4V1P10720 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PF4V1P10720 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
PF4V1P10720 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.07■□□□□ 0.64
PF4V1P10720 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PF4V1P10720 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.06■□□□□ 0.64
PF4V1P10720 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.06■□□□□ 0.64
PF4V1P10720 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PF4V1P10720 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PF4V1P10720 AL121749.1-202ENST00000609313 2153 ntBASIC19.06■□□□□ 0.64
PF4V1P10720 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.06■□□□□ 0.64
PF4V1P10720 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PF4V1P10720 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PF4V1P10720 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.05■□□□□ 0.64
PF4V1P10720 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PF4V1P10720 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.04■□□□□ 0.64
PF4V1P10720 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PF4V1P10720 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PF4V1P10720 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PF4V1P10720 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PF4V1P10720 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PF4V1P10720 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.04■□□□□ 0.64
PF4V1P10720 DUX4L9-201ENST00000449051 1259 ntBASIC19.04■□□□□ 0.64
PF4V1P10720 AC139795.1-202ENST00000500444 432 ntBASIC19.04■□□□□ 0.64
PF4V1P10720 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PF4V1P10720 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PF4V1P10720 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.04■□□□□ 0.64
PF4V1P10720 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PF4V1P10720 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.03■□□□□ 0.64
PF4V1P10720 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PF4V1P10720 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PF4V1P10720 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.03■□□□□ 0.64
PF4V1P10720 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PF4V1P10720 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PF4V1P10720 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PF4V1P10720 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PF4V1P10720 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
PF4V1P10720 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
PF4V1P10720 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.02■□□□□ 0.64
PF4V1P10720 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.02■□□□□ 0.64
PF4V1P10720 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PF4V1P10720 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PF4V1P10720 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PF4V1P10720 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PF4V1P10720 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PF4V1P10720 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PF4V1P10720 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PF4V1P10720 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PF4V1P10720 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PF4V1P10720 AC018755.3-202ENST00000596210 929 ntBASIC19.01■□□□□ 0.63
PF4V1P10720 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PF4V1P10720 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PF4V1P10720 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.01■□□□□ 0.63
PF4V1P10720 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PF4V1P10720 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
PF4V1P10720 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PF4V1P10720 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19■□□□□ 0.63
PF4V1P10720 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19■□□□□ 0.63
PF4V1P10720 RAP2CP1-202ENST00000605179 643 ntBASIC19■□□□□ 0.63
PF4V1P10720 MIR6765-201ENST00000614092 87 ntBASIC19■□□□□ 0.63
PF4V1P10720 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PF4V1P10720 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19■□□□□ 0.63
PF4V1P10720 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.99■□□□□ 0.63
PF4V1P10720 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.99■□□□□ 0.63
PF4V1P10720 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PF4V1P10720 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
PF4V1P10720 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PF4V1P10720 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PF4V1P10720 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PF4V1P10720 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PF4V1P10720 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PF4V1P10720 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.98■□□□□ 0.63
PF4V1P10720 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PF4V1P10720 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PF4V1P10720 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PF4V1P10720 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.98■□□□□ 0.63
PF4V1P10720 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PF4V1P10720 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PF4V1P10720 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PF4V1P10720 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.97■□□□□ 0.63
PF4V1P10720 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PF4V1P10720 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms