Protein–RNA interactions for Protein: P09884

POLA1, DNA polymerase alpha catalytic subunit, humanhuman

Predicted RBP Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLA1P09884 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC41.33■■■■■ 4.21
POLA1P09884 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC41.33■■■■■ 4.21
POLA1P09884 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC41.32■■■■■ 4.21
POLA1P09884 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC41.32■■■■■ 4.21
POLA1P09884 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC41.32■■■■■ 4.2
POLA1P09884 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC41.31■■■■■ 4.2
POLA1P09884 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
POLA1P09884 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
POLA1P09884 AL139246.5-201ENST00000606645 996 ntBASIC41.31■■■■■ 4.2
POLA1P09884 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
POLA1P09884 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
POLA1P09884 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
POLA1P09884 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
POLA1P09884 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC41.29■■■■■ 4.2
POLA1P09884 AC022616.5-201ENST00000518796 181 ntBASIC41.28■■■■■ 4.2
POLA1P09884 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC41.28■■■■■ 4.2
POLA1P09884 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
POLA1P09884 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
POLA1P09884 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC41.28■■■■■ 4.2
POLA1P09884 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
POLA1P09884 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
POLA1P09884 RALB-208ENST00000631312 311 ntTSL 5 BASIC41.28■■■■■ 4.2
POLA1P09884 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC41.27■■■■■ 4.2
POLA1P09884 AC137630.3-201ENST00000607245 391 ntBASIC41.26■■■■■ 4.2
POLA1P09884 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC41.24■■■■■ 4.19
POLA1P09884 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC41.24■■■■■ 4.19
POLA1P09884 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC41.24■■■■■ 4.19
POLA1P09884 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC41.24■■■■■ 4.19
POLA1P09884 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC41.24■■■■■ 4.19
POLA1P09884 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC41.24■■■■■ 4.19
POLA1P09884 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC41.23■■■■■ 4.19
POLA1P09884 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC41.23■■■■■ 4.19
POLA1P09884 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC41.23■■■■■ 4.19
POLA1P09884 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC41.23■■■■■ 4.19
POLA1P09884 AC021242.3-201ENST00000607598 1377 ntBASIC41.23■■■■■ 4.19
POLA1P09884 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
POLA1P09884 TRIR-202ENST00000588213 841 ntTSL 3 BASIC41.22■■■■■ 4.19
POLA1P09884 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC41.22■■■■■ 4.19
POLA1P09884 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
POLA1P09884 KRT18P24-201ENST00000344739 1156 ntBASIC41.21■■■■■ 4.19
POLA1P09884 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC41.21■■■■■ 4.19
POLA1P09884 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC41.2■■■■■ 4.19
POLA1P09884 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC41.19■■■■■ 4.18
POLA1P09884 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC41.19■■■■■ 4.18
POLA1P09884 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC41.18■■■■■ 4.18
POLA1P09884 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
POLA1P09884 NALT1-201ENST00000429224 738 ntTSL 5 BASIC41.17■■■■■ 4.18
POLA1P09884 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
POLA1P09884 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC41.15■■■■■ 4.18
POLA1P09884 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC41.15■■■■■ 4.18
POLA1P09884 AC110285.6-201ENST00000617652 491 ntBASIC41.15■■■■■ 4.18
POLA1P09884 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
POLA1P09884 TSPY9P-201ENST00000440215 945 ntBASIC41.15■■■■■ 4.18
POLA1P09884 TSPY11P-201ENST00000442607 1045 ntBASIC41.15■■■■■ 4.18
POLA1P09884 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC41.15■■■■■ 4.18
POLA1P09884 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC41.15■■■■■ 4.18
POLA1P09884 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC41.14■■■■■ 4.18
POLA1P09884 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC41.14■■■■■ 4.18
POLA1P09884 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC41.14■■■■■ 4.18
POLA1P09884 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC41.12■■■■■ 4.17
POLA1P09884 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC41.12■■■■■ 4.17
POLA1P09884 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
POLA1P09884 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC41.11■■■■■ 4.17
POLA1P09884 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
POLA1P09884 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
POLA1P09884 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC41.11■■■■■ 4.17
POLA1P09884 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC41.11■■■■■ 4.17
POLA1P09884 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC41.11■■■■■ 4.17
POLA1P09884 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC41.1■■■■■ 4.17
POLA1P09884 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
POLA1P09884 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC41.1■■■■■ 4.17
POLA1P09884 RPP21-222ENST00000433076 577 ntTSL 2 BASIC41.1■■■■■ 4.17
POLA1P09884 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC41.1■■■■■ 4.17
POLA1P09884 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
POLA1P09884 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
POLA1P09884 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
POLA1P09884 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC41.09■■■■■ 4.17
POLA1P09884 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC41.09■■■■■ 4.17
POLA1P09884 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
POLA1P09884 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC41.09■■■■■ 4.17
POLA1P09884 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC41.09■■■■■ 4.17
POLA1P09884 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC41.09■■■■■ 4.17
POLA1P09884 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC41.09■■■■■ 4.17
POLA1P09884 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
POLA1P09884 AL117332.1-201ENST00000622628 974 ntBASIC41.08■■■■■ 4.17
POLA1P09884 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC41.07■■■■■ 4.17
POLA1P09884 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
POLA1P09884 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC41.07■■■■■ 4.16
POLA1P09884 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC41.06■■■■■ 4.16
POLA1P09884 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC41.06■■■■■ 4.16
POLA1P09884 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC41.06■■■■■ 4.16
POLA1P09884 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC41.06■■■■■ 4.16
POLA1P09884 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC41.05■■■■■ 4.16
POLA1P09884 AC120024.1-201ENST00000562672 995 ntBASIC41.05■■■■■ 4.16
POLA1P09884 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC41.04■■■■■ 4.16
POLA1P09884 AL136116.3-201ENST00000402907 1138 ntBASIC41.03■■■■■ 4.16
POLA1P09884 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC41.03■■■■■ 4.16
POLA1P09884 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC41.02■■■■■ 4.16
POLA1P09884 SRR-208ENST00000576848 588 ntTSL 4 BASIC41.02■■■■■ 4.16
POLA1P09884 AC092028.1-203ENST00000608262 953 ntBASIC41.02■■■■■ 4.16
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms