Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV12-3P01733 U85056.1-201ENST00000616429 682 ntBASIC18.73■□□□□ 0.59
TRBV12-3P01733 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV12-3P01733 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV12-3P01733 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV12-3P01733 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV12-3P01733 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.72■□□□□ 0.59
TRBV12-3P01733 RAP2CP1-202ENST00000605179 643 ntBASIC18.72■□□□□ 0.59
TRBV12-3P01733 AC133552.2-201ENST00000619106 1032 ntBASIC18.72■□□□□ 0.59
TRBV12-3P01733 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV12-3P01733 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV12-3P01733 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV12-3P01733 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV12-3P01733 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV12-3P01733 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV12-3P01733 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRBV12-3P01733 ERN1-208ENST00000606895 2068 ntBASIC18.71■□□□□ 0.59
TRBV12-3P01733 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV12-3P01733 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV12-3P01733 AC092803.2-201ENST00000564287 1899 ntBASIC18.71■□□□□ 0.59
TRBV12-3P01733 AC091060.1-201ENST00000623524 1766 ntBASIC18.7■□□□□ 0.58
TRBV12-3P01733 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV12-3P01733 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV12-3P01733 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRBV12-3P01733 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV12-3P01733 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV12-3P01733 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV12-3P01733 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV12-3P01733 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV12-3P01733 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV12-3P01733 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV12-3P01733 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV12-3P01733 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV12-3P01733 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRBV12-3P01733 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV12-3P01733 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV12-3P01733 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV12-3P01733 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV12-3P01733 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV12-3P01733 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV12-3P01733 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV12-3P01733 AL592293.1-201ENST00000502889 1188 ntBASIC18.68■□□□□ 0.58
TRBV12-3P01733 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRBV12-3P01733 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV12-3P01733 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV12-3P01733 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV12-3P01733 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV12-3P01733 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV12-3P01733 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV12-3P01733 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV12-3P01733 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV12-3P01733 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV12-3P01733 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV12-3P01733 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV12-3P01733 NTF6A-201ENST00000591175 560 ntBASIC18.66■□□□□ 0.58
TRBV12-3P01733 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV12-3P01733 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.66■□□□□ 0.58
TRBV12-3P01733 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV12-3P01733 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV12-3P01733 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV12-3P01733 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRBV12-3P01733 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV12-3P01733 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.65■□□□□ 0.58
TRBV12-3P01733 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV12-3P01733 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV12-3P01733 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV12-3P01733 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV12-3P01733 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV12-3P01733 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.65■□□□□ 0.58
TRBV12-3P01733 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRBV12-3P01733 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV12-3P01733 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.64■□□□□ 0.58
TRBV12-3P01733 KRT18P60-201ENST00000312876 1297 ntBASIC18.64■□□□□ 0.57
TRBV12-3P01733 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV12-3P01733 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRBV12-3P01733 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV12-3P01733 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV12-3P01733 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV12-3P01733 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV12-3P01733 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV12-3P01733 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.63■□□□□ 0.57
TRBV12-3P01733 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV12-3P01733 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV12-3P01733 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV12-3P01733 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV12-3P01733 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV12-3P01733 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.62■□□□□ 0.57
TRBV12-3P01733 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV12-3P01733 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV12-3P01733 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV12-3P01733 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV12-3P01733 SPCS2P3-201ENST00000500401 656 ntBASIC18.61■□□□□ 0.57
TRBV12-3P01733 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV12-3P01733 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV12-3P01733 AC145676.1-201ENST00000514988 2004 ntBASIC18.61■□□□□ 0.57
TRBV12-3P01733 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV12-3P01733 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV12-3P01733 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV12-3P01733 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV12-3P01733 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms