Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.77■■□□□ 1.88
TIMP1P01033 AL139246.5-201ENST00000606645 996 ntBASIC26.77■■□□□ 1.88
TIMP1P01033 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.77■■□□□ 1.88
TIMP1P01033 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TIMP1P01033 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.76■■□□□ 1.87
TIMP1P01033 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TIMP1P01033 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TIMP1P01033 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TIMP1P01033 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TIMP1P01033 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.74■■□□□ 1.87
TIMP1P01033 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
TIMP1P01033 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.74■■□□□ 1.87
TIMP1P01033 KRT18P10-201ENST00000388836 1287 ntBASIC26.73■■□□□ 1.87
TIMP1P01033 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TIMP1P01033 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TIMP1P01033 AC137630.3-201ENST00000607245 391 ntBASIC26.73■■□□□ 1.87
TIMP1P01033 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TIMP1P01033 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TIMP1P01033 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.72■■□□□ 1.87
TIMP1P01033 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.72■■□□□ 1.87
TIMP1P01033 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TIMP1P01033 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.71■■□□□ 1.87
TIMP1P01033 TSPY9P-201ENST00000440215 945 ntBASIC26.71■■□□□ 1.87
TIMP1P01033 TSPY11P-201ENST00000442607 1045 ntBASIC26.71■■□□□ 1.87
TIMP1P01033 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TIMP1P01033 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.71■■□□□ 1.87
TIMP1P01033 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.71■■□□□ 1.87
TIMP1P01033 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.7■■□□□ 1.86
TIMP1P01033 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.7■■□□□ 1.86
TIMP1P01033 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.7■■□□□ 1.86
TIMP1P01033 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TIMP1P01033 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.7■■□□□ 1.86
TIMP1P01033 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.7■■□□□ 1.86
TIMP1P01033 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.7■■□□□ 1.86
TIMP1P01033 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TIMP1P01033 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
TIMP1P01033 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TIMP1P01033 AC021242.3-201ENST00000607598 1377 ntBASIC26.69■■□□□ 1.86
TIMP1P01033 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
TIMP1P01033 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TIMP1P01033 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TIMP1P01033 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.68■■□□□ 1.86
TIMP1P01033 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TIMP1P01033 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.67■■□□□ 1.86
TIMP1P01033 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.67■■□□□ 1.86
TIMP1P01033 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.67■■□□□ 1.86
TIMP1P01033 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
TIMP1P01033 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.67■■□□□ 1.86
TIMP1P01033 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TIMP1P01033 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TIMP1P01033 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TIMP1P01033 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.66■■□□□ 1.86
TIMP1P01033 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.66■■□□□ 1.86
TIMP1P01033 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.66■■□□□ 1.86
TIMP1P01033 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.66■■□□□ 1.86
TIMP1P01033 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.65■■□□□ 1.86
TIMP1P01033 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.65■■□□□ 1.86
TIMP1P01033 AC131281.2-201ENST00000520478 145 ntBASIC26.65■■□□□ 1.86
TIMP1P01033 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TIMP1P01033 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
TIMP1P01033 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TIMP1P01033 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
TIMP1P01033 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TIMP1P01033 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TIMP1P01033 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.63■■□□□ 1.85
TIMP1P01033 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.63■■□□□ 1.85
TIMP1P01033 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.63■■□□□ 1.85
TIMP1P01033 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TIMP1P01033 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TIMP1P01033 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TIMP1P01033 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
TIMP1P01033 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.62■■□□□ 1.85
TIMP1P01033 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.62■■□□□ 1.85
TIMP1P01033 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.62■■□□□ 1.85
TIMP1P01033 AC092028.1-203ENST00000608262 953 ntBASIC26.62■■□□□ 1.85
TIMP1P01033 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.61■■□□□ 1.85
TIMP1P01033 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TIMP1P01033 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TIMP1P01033 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TIMP1P01033 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.61■■□□□ 1.85
TIMP1P01033 AC120024.1-201ENST00000562672 995 ntBASIC26.61■■□□□ 1.85
TIMP1P01033 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.61■■□□□ 1.85
TIMP1P01033 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
TIMP1P01033 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TIMP1P01033 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TIMP1P01033 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.6■■□□□ 1.85
TIMP1P01033 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.59■■□□□ 1.85
TIMP1P01033 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
TIMP1P01033 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TIMP1P01033 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TIMP1P01033 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TIMP1P01033 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TIMP1P01033 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TIMP1P01033 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TIMP1P01033 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TIMP1P01033 AL136116.3-201ENST00000402907 1138 ntBASIC26.58■■□□□ 1.85
TIMP1P01033 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.58■■□□□ 1.85
TIMP1P01033 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TIMP1P01033 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TIMP1P01033 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms