Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF253O75346 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF253O75346 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF253O75346 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF253O75346 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF253O75346 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF253O75346 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF253O75346 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF253O75346 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 AC133561.1-201ENST00000568600 2415 ntBASIC18.6■□□□□ 0.57
ZNF253O75346 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF253O75346 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF253O75346 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF253O75346 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
ZNF253O75346 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF253O75346 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF253O75346 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ZNF253O75346 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.57
ZNF253O75346 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF253O75346 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.58■□□□□ 0.56
ZNF253O75346 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF253O75346 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF253O75346 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF253O75346 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF253O75346 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF253O75346 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF253O75346 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF253O75346 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF253O75346 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF253O75346 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF253O75346 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF253O75346 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF253O75346 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF253O75346 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF253O75346 AC010501.1-201ENST00000606270 1962 ntBASIC18.57■□□□□ 0.56
ZNF253O75346 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ZNF253O75346 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF253O75346 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF253O75346 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF253O75346 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF253O75346 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF253O75346 AC012676.1-201ENST00000574705 1949 ntBASIC18.56■□□□□ 0.56
ZNF253O75346 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF253O75346 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF253O75346 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF253O75346 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ZNF253O75346 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF253O75346 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 LINC00543-201ENST00000567234 1845 ntBASIC18.55■□□□□ 0.56
ZNF253O75346 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF253O75346 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF253O75346 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF253O75346 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF253O75346 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ZNF253O75346 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF253O75346 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF253O75346 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF253O75346 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF253O75346 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF253O75346 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF253O75346 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF253O75346 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF253O75346 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF253O75346 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF253O75346 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF253O75346 AC008813.1-201ENST00000536597 885 ntBASIC18.52■□□□□ 0.56
ZNF253O75346 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF253O75346 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ZNF253O75346 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF253O75346 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF253O75346 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF253O75346 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ZNF253O75346 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF253O75346 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.51■□□□□ 0.55
ZNF253O75346 LINC01971-201ENST00000617888 1048 ntBASIC18.51■□□□□ 0.55
ZNF253O75346 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF253O75346 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF253O75346 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF253O75346 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF253O75346 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF253O75346 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF253O75346 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF253O75346 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF253O75346 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZNF253O75346 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF253O75346 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms