Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SRGAP3O43295 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
SRGAP3O43295 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SRGAP3O43295 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SRGAP3O43295 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.18■■■□□ 2.42
SRGAP3O43295 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SRGAP3O43295 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SRGAP3O43295 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
SRGAP3O43295 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
SRGAP3O43295 AC129492.7-201ENST00000622992 756 ntBASIC30.18■■■□□ 2.42
SRGAP3O43295 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SRGAP3O43295 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
SRGAP3O43295 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
SRGAP3O43295 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.17■■■□□ 2.42
SRGAP3O43295 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
SRGAP3O43295 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.16■■■□□ 2.42
SRGAP3O43295 SPCS2P3-201ENST00000500401 656 ntBASIC30.16■■■□□ 2.42
SRGAP3O43295 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
SRGAP3O43295 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SRGAP3O43295 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SRGAP3O43295 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
SRGAP3O43295 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SRGAP3O43295 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SRGAP3O43295 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SRGAP3O43295 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.15■■■□□ 2.42
SRGAP3O43295 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SRGAP3O43295 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SRGAP3O43295 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
SRGAP3O43295 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.14■■■□□ 2.42
SRGAP3O43295 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.14■■■□□ 2.42
SRGAP3O43295 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SRGAP3O43295 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SRGAP3O43295 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SRGAP3O43295 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SRGAP3O43295 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
SRGAP3O43295 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
SRGAP3O43295 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SRGAP3O43295 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SRGAP3O43295 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SRGAP3O43295 DUX4L9-201ENST00000449051 1259 ntBASIC30.12■■■□□ 2.41
SRGAP3O43295 AC012354.3-201ENST00000623734 483 ntBASIC30.12■■■□□ 2.41
SRGAP3O43295 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SRGAP3O43295 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SRGAP3O43295 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.11■■■□□ 2.41
SRGAP3O43295 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SRGAP3O43295 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.11■■■□□ 2.41
SRGAP3O43295 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.11■■■□□ 2.41
SRGAP3O43295 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SRGAP3O43295 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.1■■■□□ 2.41
SRGAP3O43295 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SRGAP3O43295 AC004987.1-201ENST00000428627 508 ntBASIC30.1■■■□□ 2.41
SRGAP3O43295 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.1■■■□□ 2.41
SRGAP3O43295 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.1■■■□□ 2.41
SRGAP3O43295 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SRGAP3O43295 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SRGAP3O43295 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.1■■■□□ 2.41
SRGAP3O43295 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
SRGAP3O43295 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.09■■■□□ 2.41
SRGAP3O43295 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.09■■■□□ 2.41
SRGAP3O43295 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.08■■■□□ 2.41
SRGAP3O43295 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.08■■■□□ 2.41
SRGAP3O43295 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC30.08■■■□□ 2.41
SRGAP3O43295 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.08■■■□□ 2.41
SRGAP3O43295 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SRGAP3O43295 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.07■■■□□ 2.4
SRGAP3O43295 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.07■■■□□ 2.4
SRGAP3O43295 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SRGAP3O43295 ATP5G2P3-201ENST00000429083 425 ntBASIC30.07■■■□□ 2.4
SRGAP3O43295 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SRGAP3O43295 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SRGAP3O43295 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SRGAP3O43295 ERN1-208ENST00000606895 2068 ntBASIC30.06■■■□□ 2.4
SRGAP3O43295 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SRGAP3O43295 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SRGAP3O43295 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SRGAP3O43295 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SRGAP3O43295 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
SRGAP3O43295 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SRGAP3O43295 AC092803.2-201ENST00000564287 1899 ntBASIC30.05■■■□□ 2.4
SRGAP3O43295 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SRGAP3O43295 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SRGAP3O43295 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.04■■■□□ 2.4
SRGAP3O43295 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SRGAP3O43295 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SRGAP3O43295 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SRGAP3O43295 DUX4L18-201ENST00000553347 1267 ntBASIC30.04■■■□□ 2.4
SRGAP3O43295 AL033527.3-201ENST00000566366 1196 ntBASIC30.04■■■□□ 2.4
SRGAP3O43295 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SRGAP3O43295 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
SRGAP3O43295 TSPY13P-201ENST00000338964 914 ntBASIC30.03■■■□□ 2.4
SRGAP3O43295 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SRGAP3O43295 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.03■■■□□ 2.4
SRGAP3O43295 AC018755.3-202ENST00000596210 929 ntBASIC30.02■■■□□ 2.4
SRGAP3O43295 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SRGAP3O43295 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
SRGAP3O43295 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.01■■■□□ 2.39
SRGAP3O43295 MIR6765-201ENST00000614092 87 ntBASIC30.01■■■□□ 2.39
SRGAP3O43295 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SRGAP3O43295 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
SRGAP3O43295 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms