Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.39■□□□□ 0.69
UPK2O00526 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UPK2O00526 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
UPK2O00526 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK2O00526 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK2O00526 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK2O00526 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK2O00526 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
UPK2O00526 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK2O00526 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
UPK2O00526 AC096887.2-201ENST00000623443 1957 ntBASIC19.38■□□□□ 0.69
UPK2O00526 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPK2O00526 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
UPK2O00526 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK2O00526 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UPK2O00526 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK2O00526 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK2O00526 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UPK2O00526 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK2O00526 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK2O00526 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK2O00526 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK2O00526 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPK2O00526 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UPK2O00526 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPK2O00526 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.36■□□□□ 0.69
UPK2O00526 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK2O00526 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.36■□□□□ 0.69
UPK2O00526 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK2O00526 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPK2O00526 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.36■□□□□ 0.69
UPK2O00526 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK2O00526 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK2O00526 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK2O00526 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UPK2O00526 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPK2O00526 AC016575.1-201ENST00000607026 382 ntBASIC19.35■□□□□ 0.69
UPK2O00526 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPK2O00526 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK2O00526 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
UPK2O00526 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.34■□□□□ 0.69
UPK2O00526 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UPK2O00526 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.34■□□□□ 0.69
UPK2O00526 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.34■□□□□ 0.69
UPK2O00526 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPK2O00526 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK2O00526 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
UPK2O00526 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
UPK2O00526 AC142381.3-201ENST00000568208 1670 ntBASIC19.33■□□□□ 0.68
UPK2O00526 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPK2O00526 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UPK2O00526 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK2O00526 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK2O00526 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK2O00526 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK2O00526 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK2O00526 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK2O00526 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
UPK2O00526 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
UPK2O00526 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK2O00526 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK2O00526 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK2O00526 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.3■□□□□ 0.68
UPK2O00526 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.3■□□□□ 0.68
UPK2O00526 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.3■□□□□ 0.68
UPK2O00526 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK2O00526 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.29■□□□□ 0.68
UPK2O00526 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPK2O00526 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.28■□□□□ 0.68
UPK2O00526 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.28■□□□□ 0.68
UPK2O00526 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK2O00526 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK2O00526 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPK2O00526 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.28■□□□□ 0.68
UPK2O00526 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK2O00526 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK2O00526 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.27■□□□□ 0.68
UPK2O00526 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPK2O00526 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPK2O00526 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
UPK2O00526 AC022211.4-201ENST00000625094 2161 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms