Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA2A8K830 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA2A8K830 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COLCA2A8K830 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COLCA2A8K830 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
COLCA2A8K830 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.83■□□□□ 0.61
COLCA2A8K830 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COLCA2A8K830 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COLCA2A8K830 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.83■□□□□ 0.6
COLCA2A8K830 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COLCA2A8K830 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COLCA2A8K830 AL121603.2-201ENST00000557373 2117 ntBASIC18.82■□□□□ 0.6
COLCA2A8K830 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA2A8K830 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.82■□□□□ 0.6
COLCA2A8K830 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA2A8K830 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA2A8K830 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COLCA2A8K830 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.81■□□□□ 0.6
COLCA2A8K830 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA2A8K830 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA2A8K830 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
COLCA2A8K830 EP400NL-214ENST00000641289 2402 ntBASIC18.81■□□□□ 0.6
COLCA2A8K830 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA2A8K830 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA2A8K830 ABCB10P4-201ENST00000566803 2184 ntBASIC18.8■□□□□ 0.6
COLCA2A8K830 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COLCA2A8K830 AC096887.2-201ENST00000623443 1957 ntBASIC18.8■□□□□ 0.6
COLCA2A8K830 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA2A8K830 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA2A8K830 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COLCA2A8K830 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA2A8K830 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.79■□□□□ 0.6
COLCA2A8K830 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA2A8K830 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COLCA2A8K830 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA2A8K830 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA2A8K830 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
COLCA2A8K830 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA2A8K830 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA2A8K830 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COLCA2A8K830 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
COLCA2A8K830 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COLCA2A8K830 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA2A8K830 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA2A8K830 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.78■□□□□ 0.6
COLCA2A8K830 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.78■□□□□ 0.6
COLCA2A8K830 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA2A8K830 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.78■□□□□ 0.6
COLCA2A8K830 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA2A8K830 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COLCA2A8K830 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COLCA2A8K830 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA2A8K830 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA2A8K830 AP004609.3-201ENST00000610705 1884 ntBASIC18.77■□□□□ 0.6
COLCA2A8K830 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COLCA2A8K830 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
COLCA2A8K830 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
COLCA2A8K830 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COLCA2A8K830 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COLCA2A8K830 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COLCA2A8K830 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA2A8K830 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA2A8K830 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.75■□□□□ 0.59
COLCA2A8K830 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA2A8K830 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA2A8K830 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA2A8K830 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA2A8K830 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COLCA2A8K830 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA2A8K830 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA2A8K830 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COLCA2A8K830 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA2A8K830 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA2A8K830 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
COLCA2A8K830 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COLCA2A8K830 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COLCA2A8K830 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.73■□□□□ 0.59
COLCA2A8K830 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA2A8K830 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
COLCA2A8K830 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA2A8K830 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA2A8K830 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA2A8K830 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA2A8K830 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA2A8K830 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COLCA2A8K830 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA2A8K830 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.72■□□□□ 0.59
COLCA2A8K830 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA2A8K830 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.71■□□□□ 0.59
COLCA2A8K830 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA2A8K830 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA2A8K830 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA2A8K830 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms