Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 AC020928.2-201ENST00000588717 2197 ntBASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 AC096887.2-201ENST00000623443 1957 ntBASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.45■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.43■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.42■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.42■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.42■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 SMPD5-203ENST00000639008 1464 ntBASIC21.41■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.4■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
IGKV1D-43A0A0B4J1Z2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 GPX1-201ENST00000419349 1106 ntBASIC21.39■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 ECEL1P2-201ENST00000461596 1295 ntBASIC21.39■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.39■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.38■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.36■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 MIR3960-201ENST00000583311 91 ntBASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.34■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IGKV1D-43A0A0B4J1Z2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.33■■□□□ 1
IGKV1D-43A0A0B4J1Z2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
IGKV1D-43A0A0B4J1Z2 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.32■■□□□ 1
IGKV1D-43A0A0B4J1Z2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IGKV1D-43A0A0B4J1Z2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IGKV1D-43A0A0B4J1Z2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.32■■□□□ 1
IGKV1D-43A0A0B4J1Z2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.32■■□□□ 1
IGKV1D-43A0A0B4J1Z2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IGKV1D-43A0A0B4J1Z2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
IGKV1D-43A0A0B4J1Z2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IGKV1D-43A0A0B4J1Z2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IGKV1D-43A0A0B4J1Z2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.31■■□□□ 1
IGKV1D-43A0A0B4J1Z2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
IGKV1D-43A0A0B4J1Z2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
IGKV1D-43A0A0B4J1Z2 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms