Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC187A0A096LP49 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC187A0A096LP49 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC187A0A096LP49 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC187A0A096LP49 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC187A0A096LP49 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC187A0A096LP49 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC187A0A096LP49 AC022616.5-201ENST00000518796 181 ntBASIC23.16■■□□□ 1.3
CCDC187A0A096LP49 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC187A0A096LP49 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC187A0A096LP49 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CCDC187A0A096LP49 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC187A0A096LP49 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC187A0A096LP49 KRT125P-201ENST00000546827 989 ntBASIC23.15■■□□□ 1.3
CCDC187A0A096LP49 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CCDC187A0A096LP49 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC187A0A096LP49 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC187A0A096LP49 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CCDC187A0A096LP49 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
CCDC187A0A096LP49 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CCDC187A0A096LP49 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 BX664725.1-201ENST00000438252 379 ntBASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC187A0A096LP49 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.12■■□□□ 1.29
CCDC187A0A096LP49 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CCDC187A0A096LP49 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CCDC187A0A096LP49 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC187A0A096LP49 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CCDC187A0A096LP49 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC187A0A096LP49 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC187A0A096LP49 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CCDC187A0A096LP49 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC187A0A096LP49 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC187A0A096LP49 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC187A0A096LP49 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC187A0A096LP49 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.1■■□□□ 1.29
CCDC187A0A096LP49 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC187A0A096LP49 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC187A0A096LP49 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 MIR4787-201ENST00000607364 84 ntBASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 AC008406.3-201ENST00000620001 1374 ntBASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC187A0A096LP49 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC187A0A096LP49 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC187A0A096LP49 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.08■■□□□ 1.29
CCDC187A0A096LP49 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC187A0A096LP49 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CCDC187A0A096LP49 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCDC187A0A096LP49 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC187A0A096LP49 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CCDC187A0A096LP49 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC187A0A096LP49 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC187A0A096LP49 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC187A0A096LP49 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC187A0A096LP49 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 KRT18P24-201ENST00000344739 1156 ntBASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 AL449106.1-201ENST00000608517 1980 ntBASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.05■■□□□ 1.28
CCDC187A0A096LP49 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC187A0A096LP49 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.03■■□□□ 1.28
CCDC187A0A096LP49 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.03■■□□□ 1.28
CCDC187A0A096LP49 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC187A0A096LP49 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.03■■□□□ 1.28
CCDC187A0A096LP49 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC187A0A096LP49 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms