Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 AC097637.2-201ENST00000624096 1997 ntBASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 AP001094.4-201ENST00000579008 2176 ntBASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB13Q9Y5F0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 ACTG1P4-201ENST00000425123 1122 ntBASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 AC107308.1-201ENST00000615897 301 ntBASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHB13Q9Y5F0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 EMBP1-201ENST00000458200 901 ntBASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB13Q9Y5F0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 PSAT1P2-201ENST00000426107 972 ntBASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 SART3-203ENST00000546611 1184 ntBASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB13Q9Y5F0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms