Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 AC027612.4-201ENST00000605371 583 ntBASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 AC026120.1-201ENST00000611536 926 ntBASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 PMS2P4-201ENST00000412466 1052 ntBASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 RARRES2P8-201ENST00000566335 367 ntBASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SYNPO2Q9UMS6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 RNU1-129P-201ENST00000384064 167 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 AL671277.1-201ENST00000429656 993 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 U1.21-201ENST00000580816 167 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 MIR4492-201ENST00000581627 80 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 TUBB8P12-201ENST00000308911 1335 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 TUBB7P-202ENST00000428444 1305 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 TUBB8P7-204ENST00000567960 1332 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 AC068880.1-201ENST00000507289 2297 ntBASIC19.67■□□□□ 0.74
SYNPO2Q9UMS6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 AC131009.4-201ENST00000624048 1740 ntBASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms