Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 HTR7P1-201ENST00000538670 1336 ntBASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBQLN2Q9UHD9 GPAT2P1-201ENST00000444924 1672 ntBASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UBQLN2Q9UHD9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 RPS2P4-201ENST00000476944 856 ntBASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 AC007326.2-201ENST00000624224 7579 ntBASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
UBQLN2Q9UHD9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBQLN2Q9UHD9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.59□□□□□ -0.07
UBQLN2Q9UHD9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.59□□□□□ -0.07
UBQLN2Q9UHD9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBQLN2Q9UHD9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.59□□□□□ -0.07
UBQLN2Q9UHD9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms