Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 NKILA-202ENST00000614771 2598 ntBASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 AC073621.1-201ENST00000392730 636 ntBASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 FAAHP1-202ENST00000446499 1238 ntBASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 AC243591.1-201ENST00000452967 1364 ntBASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 KRT18P67-201ENST00000432816 1264 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AC073648.2-201ENST00000510116 352 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 OR7E14P-202ENST00000530490 1290 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AP002469.2-201ENST00000531724 424 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AC012640.2-201ENST00000561606 901 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 TERC-201ENST00000602385 541 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AC011676.5-201ENST00000624864 2660 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 AGGF1P2-201ENST00000426656 2106 ntBASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BLOC1S4Q9NUP1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 PTCHD3P3-201ENST00000403073 906 ntBASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms