Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 ATP5G2P1-201ENST00000433580 426 ntBASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 AC113404.2-201ENST00000507884 177 ntBASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 AL139327.4-201ENST00000612362 153 ntBASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCM2LQ9NUG4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCM2LQ9NUG4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCM2LQ9NUG4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.46■□□□□ 0.22
CCM2LQ9NUG4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 AC093525.9-201ENST00000624961 1746 ntBASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 KRT18P65-201ENST00000439811 1286 ntBASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 AC007950.2-201ENST00000615045 2347 ntBASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.45■□□□□ 0.22
CCM2LQ9NUG4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 RN7SL510P-201ENST00000581311 263 ntBASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 AC083849.1-201ENST00000615227 514 ntBASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCM2LQ9NUG4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms