Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
UPF2Q9HAU5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 AC008741.2-201ENST00000612792 3115 ntBASIC21.2■□□□□ 0.98
UPF2Q9HAU5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF2Q9HAU5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.19■□□□□ 0.98
UPF2Q9HAU5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 CICP6-201ENST00000457191 2729 ntBASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 MTCL1P1-201ENST00000446207 792 ntBASIC21.19■□□□□ 0.98
UPF2Q9HAU5 RASA4DP-201ENST00000460726 1199 ntBASIC21.19■□□□□ 0.98
UPF2Q9HAU5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
UPF2Q9HAU5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 AC092068.3-201ENST00000587894 2016 ntBASIC21.18■□□□□ 0.98
UPF2Q9HAU5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 IGHV3-52-201ENST00000519770 353 ntBASIC21.18■□□□□ 0.98
UPF2Q9HAU5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms