Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PHACTR1Q9C0D0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHACTR1Q9C0D0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHACTR1Q9C0D0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHACTR1Q9C0D0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 AC246785.2-201ENST00000432512 513 ntBASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 AC026691.1-201ENST00000602502 2017 ntBASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
PHACTR1Q9C0D0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 AC005521.1-201ENST00000393351 872 ntBASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 AL845331.1-201ENST00000424978 1190 ntBASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 AL592071.1-201ENST00000611956 408 ntBASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.5■□□□□ 0.39
PHACTR1Q9C0D0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 STK19B-204ENST00000512515 211 ntBASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.49■□□□□ 0.39
PHACTR1Q9C0D0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms