Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BPIFA3Q9BQP9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.06■□□□□ 0.64
BPIFA3Q9BQP9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
BPIFA3Q9BQP9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BPIFA3Q9BQP9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BPIFA3Q9BQP9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 RNF152P1-201ENST00000397754 604 ntBASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.05■□□□□ 0.64
BPIFA3Q9BQP9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 AC012306.2-201ENST00000609350 630 ntBASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 AL592071.1-201ENST00000611956 408 ntBASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 AC073912.3-201ENST00000624414 853 ntBASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.04■□□□□ 0.64
BPIFA3Q9BQP9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 AL596275.1-201ENST00000423464 877 ntBASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 AL137013.1-201ENST00000432946 1228 ntBASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 HLA-J-202ENST00000469281 1241 ntBASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BPIFA3Q9BQP9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BPIFA3Q9BQP9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BPIFA3Q9BQP9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BPIFA3Q9BQP9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BPIFA3Q9BQP9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
BPIFA3Q9BQP9 AC092364.2-201ENST00000596710 2692 ntBASIC19.02■□□□□ 0.64
BPIFA3Q9BQP9 ALOX12P2-203ENST00000570921 1945 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms