Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 AC093525.9-201ENST00000624961 1746 ntBASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 AC068880.1-201ENST00000507289 2297 ntBASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 AC002347.1-201ENST00000569543 541 ntBASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 AC129492.6-201ENST00000611383 1305 ntBASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP1Q96SZ6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 AC116353.5-201ENST00000638148 1699 ntBASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 AC002310.6-201ENST00000624451 1377 ntBASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 BX842568.4-201ENST00000421222 227 ntBASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 AC087163.2-201ENST00000457299 853 ntBASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 AC096734.2-201ENST00000562054 433 ntBASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP1Q96SZ6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP1Q96SZ6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDK5RAP1Q96SZ6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP1Q96SZ6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDK5RAP1Q96SZ6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDK5RAP1Q96SZ6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 OR7E47P-204ENST00000575924 449 ntBASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms