Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 AC138894.3-201ENST00000603787 634 ntBASIC16.38■□□□□ 0.21
BBS4Q96RK4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.38■□□□□ 0.21
BBS4Q96RK4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.37■□□□□ 0.21
BBS4Q96RK4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BBS4Q96RK4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 MIR5100-201ENST00000579544 119 ntBASIC16.36■□□□□ 0.21
BBS4Q96RK4 AL591684.3-201ENST00000605187 298 ntBASIC16.36■□□□□ 0.21
BBS4Q96RK4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms