Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 AL513477.1-201ENST00000602865 2407 ntBASIC16.61■□□□□ 0.25
VPS33AQ96AX1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 AC005332.3-201ENST00000589904 676 ntBASIC16.61■□□□□ 0.25
VPS33AQ96AX1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS33AQ96AX1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 YBX1P2-201ENST00000489612 999 ntBASIC16.6■□□□□ 0.25
VPS33AQ96AX1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 AC097374.2-201ENST00000618617 1306 ntBASIC16.6■□□□□ 0.25
VPS33AQ96AX1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS33AQ96AX1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 AL359075.1-203ENST00000462729 1002 ntBASIC16.59■□□□□ 0.25
VPS33AQ96AX1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms