Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE4Q96A23 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE4Q96A23 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CPNE4Q96A23 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CPNE4Q96A23 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CPNE4Q96A23 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE4Q96A23 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE4Q96A23 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 LINC00982-205ENST00000420957 435 ntBASIC15.5■□□□□ 0.07
CPNE4Q96A23 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 AC105339.3-201ENST00000560043 636 ntBASIC15.5■□□□□ 0.07
CPNE4Q96A23 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 AC004706.3-202ENST00000621574 984 ntBASIC15.5■□□□□ 0.07
CPNE4Q96A23 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 AC012313.1-201ENST00000593393 3059 ntBASIC15.5■□□□□ 0.07
CPNE4Q96A23 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE4Q96A23 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE4Q96A23 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 RNA5SP419-201ENST00000515908 135 ntBASIC15.49■□□□□ 0.07
CPNE4Q96A23 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 MIR7706-201ENST00000613747 67 ntBASIC15.49■□□□□ 0.07
CPNE4Q96A23 PGM5P2-202ENST00000637225 1043 ntBASIC15.49■□□□□ 0.07
CPNE4Q96A23 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE4Q96A23 LINC00896-202ENST00000609602 2128 ntBASIC15.49■□□□□ 0.07
CPNE4Q96A23 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE4Q96A23 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 CROCCP1-201ENST00000426910 5675 ntBASIC15.48■□□□□ 0.07
CPNE4Q96A23 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 AC139713.2-201ENST00000641328 2723 ntBASIC15.48■□□□□ 0.07
CPNE4Q96A23 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms