Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC092552.1-201ENST00000547243 906 ntBASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 AL139327.4-201ENST00000612362 153 ntBASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC11.44□□□□□ -0.58
ALMS1Q8TCU4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AL023806.1-201ENST00000603994 1649 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 SPDYE19P-201ENST00000338590 713 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 TTTY23B-201ENST00000442790 549 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 USP32P1-208ENST00000506594 1164 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AC003101.2-201ENST00000612557 442 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 BTBD7P1-201ENST00000447253 1453 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AC093004.1-201ENST00000508850 424 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AL589739.1-201ENST00000607720 493 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 AC087499.5-201ENST00000452760 1342 ntBASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
ALMS1Q8TCU4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 CROCCP3-202ENST00000420820 1947 ntBASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 MYCLP2-201ENST00000449268 967 ntBASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms