Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 DBET-201ENST00000630918 3363 ntBASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 AL135905.2-201ENST00000584934 1404 ntBASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 HLA-A-202ENST00000376806 1854 ntBASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 AC007663.1-201ENST00000438948 1240 ntBASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 CCR12P-201ENST00000446203 998 ntBASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 TSPY20P-201ENST00000450910 630 ntBASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 ALOX12P2-203ENST00000570921 1945 ntBASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNIH3Q8TBE1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 AC112698.1-201ENST00000510299 916 ntBASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNIH3Q8TBE1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms