Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 LINC00896-202ENST00000609602 2128 ntBASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf42Q8N5U0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 RN7SL510P-201ENST00000581311 263 ntBASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 AL691432.3-201ENST00000621860 400 ntBASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf42Q8N5U0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 STK25P1-201ENST00000585406 838 ntBASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 LINC01711-201ENST00000598340 967 ntBASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 AL355877.3-201ENST00000622820 899 ntBASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
C11orf42Q8N5U0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms