Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 AC004817.3-201ENST00000602957 2129 ntBASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 LINC02012-201ENST00000608206 1725 ntBASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 AD000864.1-201ENST00000624076 2295 ntBASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC116Q8IYX3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 AC092053.1-201ENST00000605787 1936 ntBASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 AC079776.2-201ENST00000641154 1609 ntBASIC16.27■□□□□ 0.19
CCDC116Q8IYX3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 AC060834.1-201ENST00000443027 2032 ntBASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 KRT18P56-201ENST00000507275 550 ntBASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 AC012313.10-201ENST00000623509 926 ntBASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC116Q8IYX3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms