Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 AC069148.1-201ENST00000608741 768 ntBASIC15.96■□□□□ 0.15
VRK2Q86Y07 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK2Q86Y07 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
VRK2Q86Y07 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
VRK2Q86Y07 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VRK2Q86Y07 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VRK2Q86Y07 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VRK2Q86Y07 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.96■□□□□ 0.14
VRK2Q86Y07 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 AC104819.1-201ENST00000504587 486 ntBASIC15.95■□□□□ 0.14
VRK2Q86Y07 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 AC092119.3-201ENST00000612618 583 ntBASIC15.95■□□□□ 0.14
VRK2Q86Y07 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK2Q86Y07 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK2Q86Y07 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 RNF216P1-203ENST00000404404 2427 ntBASIC15.94■□□□□ 0.14
VRK2Q86Y07 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms