Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AL035633.1-201ENST00000406139 838 ntBASIC15.25■□□□□ 0.03
RTTNQ86VV8 AL031284.1-201ENST00000419297 478 ntBASIC15.25■□□□□ 0.03
RTTNQ86VV8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 AC103564.2-201ENST00000432853 1299 ntBASIC15.25■□□□□ 0.03
RTTNQ86VV8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 AC064862.7-201ENST00000604520 867 ntBASIC15.25■□□□□ 0.03
RTTNQ86VV8 AL591684.3-201ENST00000605187 298 ntBASIC15.25■□□□□ 0.03
RTTNQ86VV8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 PMPCAP1-201ENST00000508114 1576 ntBASIC15.25■□□□□ 0.03
RTTNQ86VV8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AC122714.2-201ENST00000502787 707 ntBASIC15.24■□□□□ 0.03
RTTNQ86VV8 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AC244107.1-201ENST00000442033 332 ntBASIC15.24■□□□□ 0.03
RTTNQ86VV8 MINOS1P3-201ENST00000457048 203 ntBASIC15.24■□□□□ 0.03
RTTNQ86VV8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AF238378.1-201ENST00000526806 358 ntBASIC15.24■□□□□ 0.03
RTTNQ86VV8 SART3-203ENST00000546611 1184 ntBASIC15.24■□□□□ 0.03
RTTNQ86VV8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 AC011467.2-201ENST00000598425 242 ntBASIC15.24■□□□□ 0.03
RTTNQ86VV8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.24■□□□□ 0.03
RTTNQ86VV8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTTNQ86VV8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 HYMAI-201ENST00000635591 3347 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms