Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CROCCP2-202ENST00000412962 2773 ntBASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 PMS2P1-201ENST00000431037 1228 ntBASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 TERC-201ENST00000602385 541 ntBASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 AC116353.5-201ENST00000638148 1699 ntBASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM4Q86VH4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.89■□□□□ 0.3
LRRTM4Q86VH4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 MIR574-201ENST00000385209 96 ntBASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 KRT18P58-201ENST00000527480 1120 ntBASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 MIR4751-201ENST00000578027 74 ntBASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM4Q86VH4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 MRPL20P1-201ENST00000400819 433 ntBASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 AC027601.4-201ENST00000611259 610 ntBASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 AC004790.2-201ENST00000623588 572 ntBASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms