Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC141Q6ZP82 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC141Q6ZP82 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC141Q6ZP82 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC25.42■■□□□ 1.66
CCDC141Q6ZP82 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC141Q6ZP82 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 AL035252.4-201ENST00000624174 288 ntBASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC141Q6ZP82 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 METTL26-204ENST00000397665 558 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 MRPS18AP1-201ENST00000414458 589 ntBASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 NKG7-205ENST00000600427 520 ntTSL 3 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 AC116353.5-201ENST00000638148 1699 ntBASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 AC097493.3-201ENST00000509725 367 ntBASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 AC005225.4-201ENST00000557330 545 ntBASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 AC135050.7-201ENST00000624508 2218 ntBASIC25.4■■□□□ 1.66
CCDC141Q6ZP82 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.39■■□□□ 1.66
CCDC141Q6ZP82 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC141Q6ZP82 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC141Q6ZP82 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC141Q6ZP82 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC25.39■■□□□ 1.66
CCDC141Q6ZP82 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC141Q6ZP82 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 AC004890.2-204ENST00000481968 304 ntBASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 MPDU1-223ENST00000582151 728 ntBASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 SPDYE12P-201ENST00000618416 771 ntBASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CCDC141Q6ZP82 FOXO1B-201ENST00000504678 1527 ntBASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 COMP-202ENST00000425807 2292 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 CYP2A7P1-201ENST00000595391 815 ntBASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 AC093525.9-201ENST00000624961 1746 ntBASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC141Q6ZP82 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CCDC141Q6ZP82 FRMD8P1-201ENST00000440433 1524 ntBASIC25.37■■□□□ 1.65
CCDC141Q6ZP82 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC141Q6ZP82 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC141Q6ZP82 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC141Q6ZP82 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC25.37■■□□□ 1.65
CCDC141Q6ZP82 AC105233.2-201ENST00000523697 349 ntBASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms