Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 AC100803.2-201ENST00000562459 1963 ntBASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP4Q6PIL6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AC126177.1-201ENST00000547829 2218 ntBASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AC034236.2-201ENST00000606662 1610 ntBASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 ID1-201ENST00000376105 1233 ntBASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AC004264.1-201ENST00000608354 794 ntBASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
KCNIP4Q6PIL6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
KCNIP4Q6PIL6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
KCNIP4Q6PIL6 AC078925.2-201ENST00000624013 1973 ntBASIC13.4□□□□□ -0.27
KCNIP4Q6PIL6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
KCNIP4Q6PIL6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 RNA5SP413-201ENST00000516373 109 ntBASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms