Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEF9Q5VWM5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF9Q5VWM5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 DUX4L17-201ENST00000557360 1267 ntBASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 GPR89P-201ENST00000407924 1495 ntBASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 AL356309.3-201ENST00000624132 1934 ntBASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF9Q5VWM5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 AC008608.2-201ENST00000606089 416 ntBASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 AL353135.1-201ENST00000606729 504 ntBASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PRAMEF9Q5VWM5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 AL590787.1-201ENST00000568856 1315 ntBASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRAMEF9Q5VWM5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms