Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RPL39P62891 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.24□□□□□ -0.45
RPL39P62891 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 RPS2P55-201ENST00000397318 883 ntBASIC12.24□□□□□ -0.45
RPL39P62891 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.24□□□□□ -0.45
RPL39P62891 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.24□□□□□ -0.45
RPL39P62891 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.24□□□□□ -0.45
RPL39P62891 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RPL39P62891 AC107956.1-201ENST00000494359 873 ntBASIC12.24□□□□□ -0.45
RPL39P62891 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.24□□□□□ -0.45
RPL39P62891 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.24□□□□□ -0.45
RPL39P62891 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.24□□□□□ -0.45
RPL39P62891 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.24□□□□□ -0.45
RPL39P62891 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.24□□□□□ -0.45
RPL39P62891 AC026471.5-201ENST00000615068 467 ntBASIC12.24□□□□□ -0.45
RPL39P62891 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.24□□□□□ -0.45
RPL39P62891 AL157888.1-201ENST00000631930 593 ntBASIC12.24□□□□□ -0.45
RPL39P62891 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RPL39P62891 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RPL39P62891 AC063926.3-201ENST00000624734 5658 ntBASIC12.23□□□□□ -0.45
RPL39P62891 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.23□□□□□ -0.45
RPL39P62891 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.23□□□□□ -0.45
RPL39P62891 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.23□□□□□ -0.45
RPL39P62891 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 ID1-201ENST00000376105 1233 ntBASIC12.23□□□□□ -0.45
RPL39P62891 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.23□□□□□ -0.45
RPL39P62891 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RPL39P62891 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.23□□□□□ -0.45
RPL39P62891 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.23□□□□□ -0.45
RPL39P62891 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.23□□□□□ -0.45
RPL39P62891 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.23□□□□□ -0.45
RPL39P62891 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 AP001412.1-201ENST00000608405 714 ntBASIC12.23□□□□□ -0.45
RPL39P62891 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 AC092666.2-201ENST00000613287 246 ntBASIC12.23□□□□□ -0.45
RPL39P62891 AL049637.2-201ENST00000641778 930 ntBASIC12.23□□□□□ -0.45
RPL39P62891 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RPL39P62891 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.23□□□□□ -0.45
RPL39P62891 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.23□□□□□ -0.45
RPL39P62891 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.23□□□□□ -0.45
RPL39P62891 AL513523.2-202ENST00000427283 2040 ntBASIC12.23□□□□□ -0.45
RPL39P62891 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.23□□□□□ -0.45
RPL39P62891 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 FLJ16779-201ENST00000612722 7638 ntBASIC12.23□□□□□ -0.45
RPL39P62891 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPL39P62891 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RPL39P62891 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 UNC93B2-201ENST00000285383 730 ntBASIC12.22□□□□□ -0.45
RPL39P62891 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.22□□□□□ -0.45
RPL39P62891 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms