Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.85□□□□□ -0.03
AP3S2P59780 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.85□□□□□ -0.03
AP3S2P59780 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.85□□□□□ -0.03
AP3S2P59780 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.85□□□□□ -0.03
AP3S2P59780 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP3S2P59780 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 AC010240.3-201ENST00000607688 395 ntBASIC14.85□□□□□ -0.03
AP3S2P59780 AC124016.1-201ENST00000609552 612 ntBASIC14.85□□□□□ -0.03
AP3S2P59780 DGCR10-201ENST00000609839 495 ntBASIC14.85□□□□□ -0.03
AP3S2P59780 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.85□□□□□ -0.03
AP3S2P59780 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP3S2P59780 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
AP3S2P59780 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S2P59780 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
AP3S2P59780 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 AC024909.3-201ENST00000611513 2257 ntBASIC14.85□□□□□ -0.03
AP3S2P59780 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S2P59780 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S2P59780 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
AP3S2P59780 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AP3S2P59780 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.84□□□□□ -0.03
AP3S2P59780 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S2P59780 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
AP3S2P59780 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AP3S2P59780 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.84□□□□□ -0.03
AP3S2P59780 KRT18P65-201ENST00000439811 1286 ntBASIC14.84□□□□□ -0.03
AP3S2P59780 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 AL162430.1-201ENST00000480705 870 ntBASIC14.84□□□□□ -0.03
AP3S2P59780 AP003097.1-201ENST00000530657 1135 ntBASIC14.84□□□□□ -0.03
AP3S2P59780 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.84□□□□□ -0.03
AP3S2P59780 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.84□□□□□ -0.03
AP3S2P59780 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S2P59780 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.84□□□□□ -0.03
AP3S2P59780 AC073195.1-201ENST00000607241 877 ntBASIC14.84□□□□□ -0.03
AP3S2P59780 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S2P59780 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP3S2P59780 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms