Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 COX11-210ENST00000639671 696 ntBASIC14.29□□□□□ -0.12
RIPPLY3P57055 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIPPLY3P57055 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 AC018470.1-201ENST00000624790 3129 ntBASIC14.28□□□□□ -0.12
RIPPLY3P57055 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 RN7SL589P-201ENST00000481268 310 ntBASIC14.28□□□□□ -0.12
RIPPLY3P57055 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 SIGLEC16-201ENST00000599858 1437 ntBASIC14.28□□□□□ -0.12
RIPPLY3P57055 AC244093.1-201ENST00000610837 814 ntBASIC14.28□□□□□ -0.12
RIPPLY3P57055 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 AC009154.2-201ENST00000621177 724 ntBASIC14.28□□□□□ -0.12
RIPPLY3P57055 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIPPLY3P57055 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.28□□□□□ -0.12
RIPPLY3P57055 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RIPPLY3P57055 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.27□□□□□ -0.12
RIPPLY3P57055 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RIPPLY3P57055 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.27□□□□□ -0.12
RIPPLY3P57055 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms