Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH8P55286 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDH8P55286 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH8P55286 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDH8P55286 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH8P55286 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDH8P55286 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDH8P55286 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH8P55286 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH8P55286 RPS15P9-201ENST00000494093 319 ntBASIC18.38■□□□□ 0.53
CDH8P55286 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH8P55286 AC120114.3-201ENST00000611923 658 ntBASIC18.38■□□□□ 0.53
CDH8P55286 MIR1199-201ENST00000621445 119 ntBASIC18.38■□□□□ 0.53
CDH8P55286 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.38■□□□□ 0.53
CDH8P55286 AC092053.1-201ENST00000605787 1936 ntBASIC18.38■□□□□ 0.53
CDH8P55286 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH8P55286 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDH8P55286 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH8P55286 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDH8P55286 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH8P55286 EGFEM1P-202ENST00000431685 1563 ntBASIC18.38■□□□□ 0.53
CDH8P55286 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH8P55286 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH8P55286 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
CDH8P55286 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.37■□□□□ 0.53
CDH8P55286 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDH8P55286 RNA5SP415-201ENST00000517246 115 ntBASIC18.37■□□□□ 0.53
CDH8P55286 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH8P55286 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
CDH8P55286 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH8P55286 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 BX640515.1-201ENST00000617215 977 ntBASIC18.37■□□□□ 0.53
CDH8P55286 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH8P55286 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH8P55286 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH8P55286 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH8P55286 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH8P55286 AP000347.1-202ENST00000435868 847 ntBASIC18.36■□□□□ 0.53
CDH8P55286 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.36■□□□□ 0.53
CDH8P55286 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 RPL13AP23-201ENST00000480739 586 ntBASIC18.36■□□□□ 0.53
CDH8P55286 UNC93B6-202ENST00000528242 690 ntBASIC18.36■□□□□ 0.53
CDH8P55286 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH8P55286 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH8P55286 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH8P55286 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH8P55286 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDH8P55286 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH8P55286 AC005593.1-201ENST00000624894 515 ntBASIC18.36■□□□□ 0.53
CDH8P55286 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH8P55286 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDH8P55286 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH8P55286 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH8P55286 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH8P55286 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH8P55286 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms