Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH4P55283 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.58■□□□□ 0.41
CDH4P55283 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH4P55283 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH4P55283 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH4P55283 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH4P55283 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
CDH4P55283 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH4P55283 CRYGEP-201ENST00000412192 528 ntBASIC17.58■□□□□ 0.4
CDH4P55283 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.58■□□□□ 0.4
CDH4P55283 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH4P55283 AL591424.1-201ENST00000442569 1213 ntBASIC17.58■□□□□ 0.4
CDH4P55283 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDH4P55283 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH4P55283 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CDH4P55283 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH4P55283 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH4P55283 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH4P55283 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CDH4P55283 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH4P55283 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDH4P55283 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDH4P55283 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH4P55283 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDH4P55283 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDH4P55283 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH4P55283 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH4P55283 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH4P55283 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 VN2R19P-201ENST00000442399 1052 ntBASIC17.57■□□□□ 0.4
CDH4P55283 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH4P55283 AL671883.3-201ENST00000603274 991 ntBASIC17.57■□□□□ 0.4
CDH4P55283 AC140113.2-201ENST00000604370 208 ntBASIC17.57■□□□□ 0.4
CDH4P55283 FAM197Y3-203ENST00000618346 717 ntBASIC17.57■□□□□ 0.4
CDH4P55283 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH4P55283 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH4P55283 LINC02012-201ENST00000608206 1725 ntBASIC17.57■□□□□ 0.4
CDH4P55283 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH4P55283 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH4P55283 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH4P55283 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH4P55283 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH4P55283 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH4P55283 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH4P55283 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDH4P55283 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDH4P55283 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH4P55283 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH4P55283 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH4P55283 MED15P5-201ENST00000423150 992 ntBASIC17.56■□□□□ 0.4
CDH4P55283 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH4P55283 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 AC087163.2-201ENST00000457299 853 ntBASIC17.56■□□□□ 0.4
CDH4P55283 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH4P55283 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH4P55283 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH4P55283 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH4P55283 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.56■□□□□ 0.4
CDH4P55283 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH4P55283 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH4P55283 AC005332.8-201ENST00000622750 2735 ntBASIC17.56■□□□□ 0.4
CDH4P55283 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH4P55283 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH4P55283 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH4P55283 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.55■□□□□ 0.4
CDH4P55283 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms