Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NR1H2P55055 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR1H2P55055 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR1H2P55055 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.4■□□□□ 0.22
NR1H2P55055 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.4■□□□□ 0.22
NR1H2P55055 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.4■□□□□ 0.22
NR1H2P55055 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR1H2P55055 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H2P55055 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 AC024909.3-201ENST00000611513 2257 ntBASIC16.4■□□□□ 0.22
NR1H2P55055 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H2P55055 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NR1H2P55055 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.39■□□□□ 0.21
NR1H2P55055 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.39■□□□□ 0.21
NR1H2P55055 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NR1H2P55055 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.39■□□□□ 0.21
NR1H2P55055 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.39■□□□□ 0.21
NR1H2P55055 PCED1CP-201ENST00000419887 785 ntBASIC16.39■□□□□ 0.21
NR1H2P55055 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.39■□□□□ 0.21
NR1H2P55055 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 AL121894.2-201ENST00000602977 491 ntBASIC16.39■□□□□ 0.21
NR1H2P55055 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.39■□□□□ 0.21
NR1H2P55055 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
NR1H2P55055 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.39■□□□□ 0.21
NR1H2P55055 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
NR1H2P55055 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NR1H2P55055 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
NR1H2P55055 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NR1H2P55055 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H2P55055 IER3-202ENST00000376377 1350 ntBASIC16.38■□□□□ 0.21
NR1H2P55055 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.38■□□□□ 0.21
NR1H2P55055 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.38■□□□□ 0.21
NR1H2P55055 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.38■□□□□ 0.21
NR1H2P55055 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 STARP1-201ENST00000397973 869 ntBASIC16.38■□□□□ 0.21
NR1H2P55055 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 AC104640.1-201ENST00000562617 2109 ntBASIC16.38■□□□□ 0.21
NR1H2P55055 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.38■□□□□ 0.21
NR1H2P55055 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.38■□□□□ 0.21
NR1H2P55055 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H2P55055 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NR1H2P55055 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.38■□□□□ 0.21
NR1H2P55055 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms