Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.82■□□□□ 0.28
EPHA3P29320 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EPHA3P29320 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EPHA3P29320 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.82■□□□□ 0.28
EPHA3P29320 MYCLP1-201ENST00000372451 1075 ntBASIC16.82■□□□□ 0.28
EPHA3P29320 SLC25A3P1-201ENST00000443844 931 ntBASIC16.82■□□□□ 0.28
EPHA3P29320 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.82■□□□□ 0.28
EPHA3P29320 AC124947.2-201ENST00000547118 1133 ntBASIC16.82■□□□□ 0.28
EPHA3P29320 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.82■□□□□ 0.28
EPHA3P29320 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.82■□□□□ 0.28
EPHA3P29320 AC109462.3-201ENST00000573934 613 ntBASIC16.82■□□□□ 0.28
EPHA3P29320 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.82■□□□□ 0.28
EPHA3P29320 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
EPHA3P29320 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHA3P29320 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EPHA3P29320 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 STARP1-201ENST00000397973 869 ntBASIC16.81■□□□□ 0.28
EPHA3P29320 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
EPHA3P29320 AL031432.5-201ENST00000641059 760 ntBASIC16.81■□□□□ 0.28
EPHA3P29320 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHA3P29320 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHA3P29320 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
EPHA3P29320 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA3P29320 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
EPHA3P29320 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA3P29320 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA3P29320 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHA3P29320 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
EPHA3P29320 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
EPHA3P29320 MIR662-201ENST00000384847 95 ntBASIC16.8■□□□□ 0.28
EPHA3P29320 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA3P29320 COX11P1-201ENST00000489116 835 ntBASIC16.8■□□□□ 0.28
EPHA3P29320 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 IGHV3-52-201ENST00000519770 353 ntBASIC16.8■□□□□ 0.28
EPHA3P29320 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EPHA3P29320 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHA3P29320 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHA3P29320 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA3P29320 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA3P29320 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA3P29320 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA3P29320 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHA3P29320 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EPHA3P29320 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EPHA3P29320 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA3P29320 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA3P29320 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms