Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
COL8A2P25067 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
COL8A2P25067 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 AC023274.1-201ENST00000418278 595 ntBASIC14.57□□□□□ -0.08
COL8A2P25067 BX842568.4-201ENST00000421222 227 ntBASIC14.57□□□□□ -0.08
COL8A2P25067 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 ACTG1P4-201ENST00000425123 1122 ntBASIC14.57□□□□□ -0.08
COL8A2P25067 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.57□□□□□ -0.08
COL8A2P25067 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.57□□□□□ -0.08
COL8A2P25067 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.57□□□□□ -0.08
COL8A2P25067 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 AL590787.1-201ENST00000568856 1315 ntBASIC14.57□□□□□ -0.08
COL8A2P25067 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
COL8A2P25067 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
COL8A2P25067 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL8A2P25067 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 LYSMD4-203ENST00000378904 2122 ntBASIC14.56□□□□□ -0.08
COL8A2P25067 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
COL8A2P25067 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.56□□□□□ -0.08
COL8A2P25067 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.56□□□□□ -0.08
COL8A2P25067 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.56□□□□□ -0.08
COL8A2P25067 MIR4751-201ENST00000578027 74 ntBASIC14.56□□□□□ -0.08
COL8A2P25067 AL805961.1-202ENST00000641562 540 ntBASIC14.56□□□□□ -0.08
COL8A2P25067 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.56□□□□□ -0.08
COL8A2P25067 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.56□□□□□ -0.08
COL8A2P25067 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.56□□□□□ -0.08
COL8A2P25067 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.56□□□□□ -0.08
COL8A2P25067 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.56□□□□□ -0.08
COL8A2P25067 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 PP12613-201ENST00000424958 2230 ntBASIC14.56□□□□□ -0.08
COL8A2P25067 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL8A2P25067 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms