Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.18■□□□□ 0.02
ATF1P18846 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 AC012306.2-201ENST00000609350 630 ntBASIC15.18■□□□□ 0.02
ATF1P18846 AC097493.4-201ENST00000641197 219 ntBASIC15.18■□□□□ 0.02
ATF1P18846 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ATF1P18846 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ATF1P18846 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.18■□□□□ 0.02
ATF1P18846 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
ATF1P18846 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.17■□□□□ 0.02
ATF1P18846 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.17■□□□□ 0.02
ATF1P18846 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 AC007950.2-201ENST00000615045 2347 ntBASIC15.17■□□□□ 0.02
ATF1P18846 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ATF1P18846 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 HOMER2P1-201ENST00000455653 964 ntBASIC15.17■□□□□ 0.02
ATF1P18846 AL359075.1-203ENST00000462729 1002 ntBASIC15.17■□□□□ 0.02
ATF1P18846 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.17■□□□□ 0.02
ATF1P18846 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ATF1P18846 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATF1P18846 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.17■□□□□ 0.02
ATF1P18846 AC073508.3-201ENST00000619697 1419 ntBASIC15.17■□□□□ 0.02
ATF1P18846 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATF1P18846 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
ATF1P18846 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.16■□□□□ 0.02
ATF1P18846 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ATF1P18846 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ATF1P18846 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATF1P18846 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
ATF1P18846 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 HBZP1-201ENST00000354915 429 ntBASIC15.16■□□□□ 0.02
ATF1P18846 AC005521.1-201ENST00000393351 872 ntBASIC15.16■□□□□ 0.02
ATF1P18846 RNF152P1-201ENST00000397754 604 ntBASIC15.16■□□□□ 0.02
ATF1P18846 AC096633.1-201ENST00000422446 749 ntBASIC15.16■□□□□ 0.02
ATF1P18846 TSPY5P-201ENST00000426936 936 ntBASIC15.16■□□□□ 0.02
ATF1P18846 KRT18P38-201ENST00000449496 1282 ntBASIC15.16■□□□□ 0.02
ATF1P18846 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
ATF1P18846 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 AC005332.3-201ENST00000589904 676 ntBASIC15.16■□□□□ 0.02
ATF1P18846 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.16■□□□□ 0.02
ATF1P18846 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ATF1P18846 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATF1P18846 AC073912.3-201ENST00000624414 853 ntBASIC15.16■□□□□ 0.02
ATF1P18846 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms